SELMODRAFT_85122 (Selaginella moellendorffii)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 SELMODRAFT_85122 T249809_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT-GTL1
M06968_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_col_a
0.845 0.686
AT-GTL1
M06969_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_colamp_a
0.845 0.686
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ32875 MADF 99 171
EFJ32875 MADF 248 317

Links

Other MADF family TFs
Other Selaginella moellendorffii TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.971
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.927
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.927
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.926
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.925
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.925
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.924
F775_26337 Aegilops tauschii F775_26337 I 0.924
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.922
OBART04G20290 Oryza barthii OBART04G20290 I 0.922
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.922
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.922
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.922
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.922
OB04G27270 Oryza brachyantha OB04G27270 I 0.921
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.919
Cla005046 Citrullus lanatus Cla005046 I 0.919
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.918
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.918
Si012121m.g Setaria italica Si012121m.g I 0.917
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.917
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.917
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.916
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.916
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.915
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.914
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.914
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.914
Pm024289 Prunus mume Pm024289 I 0.914
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.914
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.914
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.914
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.912
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.912
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.912
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.912
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.912
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.912
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.911
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.911
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.911
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.911
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.910
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.910
MDP0000701272 Malus domestica MDP0000701272 I 0.909
TCM_015563 Theobroma cacao TCM_015563 I 0.909
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.909
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.909
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.908
MDP0000451038 Malus domestica MDP0000451038 I 0.907
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.906
Si034382m.g Setaria italica Si034382m.g I 0.905
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.905
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.904
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.904
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.904
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.904
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.903
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.902
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.901
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.901
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.899
30068.m002635 Ricinus communis 30068.m002635 I 0.899
OB02G33250 Oryza brachyantha OB02G33250 I 0.899
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.898
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.898
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.898
OBART02G25970 Oryza barthii OBART02G25970 I 0.898
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.898
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.898
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.898
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.898
TCM_035571 Theobroma cacao TCM_035571 I 0.894
29576.m000223 Ricinus communis 29576.m000223 I 0.894
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.890
mgf004276m Mimulus guttatus mgf004276m I 0.890
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.888
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.887
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.887
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.885
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.885
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.885
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.884
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.882
mgf021983m Mimulus guttatus mgf021983m I 0.882
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.881
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.880
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.880
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.879
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.879
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.879
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.878
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.876
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.876
mgf018892m Mimulus guttatus mgf018892m N 0.875
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.874
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.874
Ca_25135 Cicer arietinum Ca_25135 I 0.873
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.872
Ca_04386 Cicer arietinum Ca_04386 I 0.871
TCM_035565 Theobroma cacao TCM_035565 I 0.870
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.870
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.869
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.869
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.868
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.868
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.867
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.866
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.866
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.865
BRADI1G77610 Brachypodium distachyon BRADI1G77610 I 0.863
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.863
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.862
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.862
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.862
PK24122.1 Cannabis sativa PK24122.1 I 0.861
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.860
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.860
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.860
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.860
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.859
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.859
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.859
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I 0.858
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.855
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.852
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.852
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.850
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.850
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.850
Pm022572 Prunus mume Pm022572 I 0.850
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.850
Cla001992 Citrullus lanatus Cla001992 I 0.850
Cla007910 Citrullus lanatus Cla007910 I 0.849
MDP0000156139 Malus domestica MDP0000156139 I 0.849
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.848
Bra003703 Brassica rapa Bra003703 I 0.848
Bo6g120870 Brassica oleracea Bo6g120870 I 0.847
Bo6g083690 Brassica oleracea Bo6g083690 I 0.847
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.847
Bra015716 Brassica rapa Bra015716 I 0.847
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.847
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.847
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.847
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.847
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.846
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.845
Bo6g049430 Brassica oleracea Bo6g049430 I 0.845
Bra040010 Brassica rapa Bra040010 I 0.845
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.845
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.843
Ca_04385 Cicer arietinum Ca_04385 I 0.843
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.843
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.842
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.842
MDP0000451107 Malus domestica MDP0000451107 I 0.842
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.842
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.840
F775_24861 Aegilops tauschii F775_24861 N 0.840
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.840
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.840
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.840
TCM_001348 Theobroma cacao TCM_001348 I 0.838
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.837
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.837
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.837
Si016578m.g Setaria italica Si016578m.g I 0.837
30206.m000769 Ricinus communis 30206.m000769 I 0.836
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.835
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.835
Bra008285 Brassica rapa Bra008285 I 0.832
Pm001889 Prunus mume Pm001889 I 0.832
Pm022570 Prunus mume Pm022570 I 0.830
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.828
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I 0.828
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.828
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.828
Bra036731 Brassica rapa Bra036731 I 0.827
gene30156-v1.0-hybrid Fragaria vesca gene30156-v1.0-hybrid N 0.826
Bo8g027460 Brassica oleracea Bo8g027460 I 0.820
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.818
Bo2g091240 Brassica oleracea Bo2g091240 I 0.817
Bra003702 Brassica rapa Bra003702 I 0.813
TRIUR3_33826 Triticum urartu TRIUR3_33826 I 0.812