Si010147m.g (Setaria italica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Si010147m.g T249812_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS04G0486400
M02273_2.00
Oryza sativa
YTAACYNNNN

NNNNRGTTAR
PBM
Weirauch et al.(2014)
pTH9338
0.968 0.859
GT-1
M02263_2.00
Arabidopsis thaliana
KTTAACCM

KGGTTAAM
PBM
Weirauch et al.(2014)
pTH8149
0.951 0.662
GT-1
M10896_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GT1_Q6_02
0.951 0.662
GT-1
M10897_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GT1_Q6
0.951 0.662
GT-1
M02274_2.00
Arabidopsis lyrata
GGTTAACC

GGTTAACC
PBM
Weirauch et al.(2014)
pTH9235
0.944 0.606
MTR_3g085960
M02270_2.00
Medicago truncatula
NWAACYNNNN

NNNNRGTTWN
PBM
Weirauch et al.(2014)
pTH9208
0.934 0.563
MDP0000164819
M02280_2.00
Malus domestica
YTAACYVNNN

NNNBRGTTAR
PBM
Weirauch et al.(2014)
pTH9204
0.927 0.634
GT-4
M02265_2.00
Arabidopsis thaliana
NHDACHNNNN

NNNNDGTHDN
PBM
Weirauch et al.(2014)
pTH7910
0.925 0.563
GT-4
M06974_2.00
Arabidopsis thaliana
AACCATGGTTAADWYWWWWHH

DDWWWWRWHTTAACCATGGTT
Dap-seq
OMalley et al.(2016)
AT3G25990_col_a
0.925 0.563
GT-4
M06975_2.00
Arabidopsis thaliana
WWMNYTAACYVWRRTTADNH

DNHTAAYYWBRGTTARNKWW
Dap-seq
OMalley et al.(2016)
AT3G25990_colamp_a
0.925 0.563
PK20543.1
M01264_2.00
Cannabis sativa
YTAACYNNNN

NNNNRGTTAR
PBM
Lambert et al.(2019)
pTH11253
0.916 0.648
29929.m004704
M02278_2.00
Ricinus communis
NDNDHDHNHN

NDNDHDHNHN
PBM
Weirauch et al.(2014)
pTH9339
0.907 0.662
fgenesh2_kg.5__353__AT3G25990.1
M02268_2.00
Arabidopsis lyrata
NNNHAACCCCYNN

NNRGGGGTTDNNN
PBM
Weirauch et al.(2014)
pTH9228
0.907 0.592
GLYMA11G37390
M02269_2.00
Glycine max
BWDACYNNNN

NNNNRGTHWV
PBM
Weirauch et al.(2014)
pTH9183
0.900 0.535
cassava13991.valid.m1
M02279_2.00
Manihot esculenta
NNDACHNNNN

NNNNDGTHNN
PBM
Weirauch et al.(2014)
pTH9206
0.890 0.634
VIT_17s0000g10420
M02275_2.00
Vitis vinifera
GTTAACYV

BRGTTAAC
PBM
Weirauch et al.(2014)
pTH9293
0.841 0.479
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si010147m MADF 112 191

Links

Other MADF family TFs
Other Setaria italica TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OS04G0486400 Oryza sativa OS04G0486400 D 0.968
Si036121m.g Setaria italica Si036121m.g I 0.968
GRMZM2G047370 Zea mays GRMZM2G047370 I 0.964
MLOC_64014 Hordeum vulgare MLOC_64014 I 0.963
OB04G23970 Oryza brachyantha OB04G23970 I 0.952
GT-1 Arabidopsis thaliana AT1G13450 D 0.951
Pavir.Ga01561 Panicum virgatum Pavir.Ga01561 I 0.951
evm.TU.supercontig_130.35 Carica papaya evm.TU.supercontig_130.35 I 0.946
GT-1 Arabidopsis lyrata scaffold_101505.1 D 0.944
Bostr.13671s0104 Boechera stricta Bostr.13671s0104 I 0.940
Cagra.3501s0157 Capsella grandiflora Cagra.3501s0157 I 0.940
PRUPE_ppa009404mg Prunus persica PRUPE_ppa009404mg I 0.940
Carubv10009313m.g Capsella rubella Carubv10009313m.g I 0.940
Thhalv10007959m.g Eutrema salsugineum Thhalv10007959m.g I 0.940
Bra026903 Brassica rapa Bra026903 I 0.940
Bra019721 Brassica rapa Bra019721 I 0.939
Bo5g017510 Brassica oleracea Bo5g017510 I 0.939
AMTR_s00005p00185670 Amborella trichopoda AMTR_s00005p00185670 I 0.935
LjT04G17.70.nc Lotus japonicus LjT04G17.70.nc I 0.934
MTR_3g085960 Medicago truncatula MTR_3g085960 D 0.934
PDK_20s1345831g002 Phoenix dactylifera PDK_20s1345831g002 I 0.933
Cucsa.394820 Cucumis sativus Cucsa.394820 I 0.933
Cla023054 Citrullus lanatus Cla023054 I 0.933
MDP0000164819 Malus domestica MDP0000164819 D 0.927
Pm006885 Prunus mume Pm006885 I 0.927
GT-4 Arabidopsis thaliana AT3G25990 D 0.925
SapurV1A.0206s0170 Salix purpurea SapurV1A.0206s0170 I 0.924
Gorai.009G333800 Gossypium raimondii Gorai.009G333800 I 0.917
POPTR_0008s17980 Populus trichocarpa POPTR_0008s17980 I 0.917
TCM_010751 Theobroma cacao TCM_010751 I 0.917
AMTR_s00055p00209070 Amborella trichopoda AMTR_s00055p00209070 I 0.916
Eucgr.J02286 Eucalyptus grandis Eucgr.J02286 I 0.916
PK20543.1 Cannabis sativa PK20543.1 D 0.916
GSMUA_Achr3G19370_001 Musa acuminata GSMUA_Achr3G19370_001 I 0.910
Bostr.0556s0275 Boechera stricta Bostr.0556s0275 I 0.908
Bo8g107400 Brassica oleracea Bo8g107400 I 0.908
fgenesh2_kg.5__353__AT3G25990.1 Arabidopsis lyrata fgenesh2_kg.5__353__AT3G25990.1 D 0.907
29929.m004704 Ricinus communis 29929.m004704 D 0.907
Eucgr.B03456 Eucalyptus grandis Eucgr.B03456 I 0.906
Thhalv10004359m.g Eutrema salsugineum Thhalv10004359m.g I 0.904
VIT_14s0171g00450 Vitis vinifera VIT_14s0171g00450 I 0.902
Gorai.008G163200 Gossypium raimondii Gorai.008G163200 I 0.900
GLYMA11G37390 Glycine max GLYMA11G37390 D 0.900
Aquca_011_00297 Aquilegia coerulea Aquca_011_00297 I 0.900
Solyc12g077540.1 Solanum lycopersicum Solyc12g077540.1 I 0.900
Carubv10017413m.g Capsella rubella Carubv10017413m.g I 0.899
Cagra.6197s0012 Capsella grandiflora Cagra.6197s0012 I 0.899
VIT_01s0010g02420 Vitis vinifera VIT_01s0010g02420 I 0.898
GLYMA18G01360 Glycine max GLYMA18G01360 I 0.898
Bo2g138840 Brassica oleracea Bo2g138840 I 0.897
Aquca_123_00031 Aquilegia coerulea Aquca_123_00031 I 0.897
Bra036354 Brassica rapa Bra036354 I 0.897
mgf016368m Mimulus guttatus mgf016368m I 0.892
SapurV1A.1719s0020 Salix purpurea SapurV1A.1719s0020 I 0.890
POPTR_0010s06510 Populus trichocarpa POPTR_0010s06510 I 0.890
evm.TU.supercontig_1453.1 Carica papaya evm.TU.supercontig_1453.1 I 0.890
Ca_11315 Cicer arietinum Ca_11315 I 0.890
cassava11841.valid.m1 Manihot esculenta cassava11841.valid.m1 I 0.890
cassava13991.valid.m1 Manihot esculenta cassava13991.valid.m1 D 0.890
Lus10036978.g Linum usitatissimum Lus10036978.g I 0.880
Ciclev10031750m.g Citrus clementina Ciclev10031750m.g I 0.876
orange1.1g015940m.g Citrus sinensis orange1.1g015940m.g I 0.876
MDP0000275412 Malus domestica MDP0000275412 I 0.876
Lus10015824.g Linum usitatissimum Lus10015824.g I 0.875
GSMUA_Achr5G17240_001 Musa acuminata GSMUA_Achr5G17240_001 I 0.873
Pm016214 Prunus mume Pm016214 I 0.871
PRUPE_ppa005942mg Prunus persica PRUPE_ppa005942mg I 0.871
VIT_17s0000g10420 Vitis vinifera VIT_17s0000g10420 D 0.841