Si022565m.g (Setaria italica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Si022565m.g T249818_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G58630
M06976_2.00
Arabidopsis thaliana
HNTCGCCGGARWHDN

NHDWYTCCGGCGAND
Dap-seq
OMalley et al.(2016)
AT3G58630_col_a
0.838 0.662
AT3G58630
M06977_2.00
Arabidopsis thaliana
NNTCGCCGGARWHDN

NHDWYTCCGGCGANN
Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a
0.838 0.662
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si022565m MADF 48 125

Links

Other MADF family TFs
Other Setaria italica TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT3G58630 Arabidopsis thaliana AT3G58630 D 0.838
Aquca_021_00219 Aquilegia coerulea Aquca_021_00219 I 0.843
mgf006505m Mimulus guttatus mgf006505m I 0.846
Cucsa.213120 Cucumis sativus Cucsa.213120 I 0.854
Cucsa.213110 Cucumis sativus Cucsa.213110 I 0.854
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.856
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.856
29900.m001628 Ricinus communis 29900.m001628 I 0.856
29814.m000741 Ricinus communis 29814.m000741 I 0.820
Cla019967 Citrullus lanatus Cla019967 I 0.854
Cla002288 Citrullus lanatus Cla002288 I 0.835
Ca_19877 Cicer arietinum Ca_19877 I 0.853
Ca_00394 Cicer arietinum Ca_00394 I 0.814
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.842
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.836
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I 0.821
TCM_029695 Theobroma cacao TCM_029695 I 0.814
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I 0.829
Bostr.20903s0103 Boechera stricta Bostr.20903s0103 I 0.837
Cagra.0686s0075 Capsella grandiflora Cagra.0686s0075 I 0.829
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.876
PK27986.1 Cannabis sativa PK27986.1 I 0.814
Thhalv10006105m.g Eutrema salsugineum Thhalv10006105m.g I 0.838
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.819
SapurV1A.0260s0280 Salix purpurea SapurV1A.0260s0280 I 0.813
Pavir.J33948 Panicum virgatum Pavir.J33948 I 0.971
Pavir.J11649 Panicum virgatum Pavir.J11649 I 0.971
orange1.1g021525m.g Citrus sinensis orange1.1g021525m.g I 0.826
MDP0000301451 Malus domestica MDP0000301451 I 0.840
Lus10025404.g Linum usitatissimum Lus10025404.g I 0.848
Lus10015282.g Linum usitatissimum Lus10015282.g I 0.848
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I 0.813
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I 0.846
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.841
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I 0.871
Ciclev10016016m.g Citrus clementina Ciclev10016016m.g I 0.826
Carubv10017646m.g Capsella rubella Carubv10017646m.g I 0.829
Sb09g028350 Sorghum bicolor Sb09g028350 I 0.965
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.878
PRUPE_ppa008833mg Prunus persica PRUPE_ppa008833mg I 0.838
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.917
OBART05G25610 Oryza barthii OBART05G25610 I 0.964
MTR_4g079960 Medicago truncatula MTR_4g079960 I 0.838
MTR_2g016140 Medicago truncatula MTR_2g016140 I 0.814
fgenesh2_kg.5__2307__AT3G58630.1 Arabidopsis lyrata fgenesh2_kg.5__2307__AT3G58630.1 I 0.836
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.880
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.917
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.913
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.907
GLYMA12G33850 Glycine max GLYMA12G33850 I 0.845
GRMZM2G157219 Zea mays GRMZM2G157219 I 0.969
GLYMA13G30280 Glycine max GLYMA13G30280 I 0.814
OGLUM05G27260 Oryza glumaepatula OGLUM05G27260 I 0.964
GLYMA15G08890 Glycine max GLYMA15G08890 I 0.814
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I 0.829
OS05G0560600 Oryza sativa OS05G0560600 I 0.964
BGIOSGA020349 Oryza indica BGIOSGA020349 I 0.964
BRADI2G16780 Brachypodium distachyon BRADI2G16780 I 0.960
ORUFI05G27490 Oryza rufipogon ORUFI05G27490 I 0.964
ORGLA05G0221200 Oryza glaberrima ORGLA05G0221200 I 0.964
BGIOSGA020351 Oryza indica BGIOSGA020351 I 0.964
OPUNC05G23220 Oryza punctata OPUNC05G23220 I 0.964
Bo6g075950 Brassica oleracea Bo6g075950 I 0.842
ONIVA05G26860 Oryza nivara ONIVA05G26860 I 0.964
Bra003346 Brassica rapa Bra003346 I 0.839
OMERI02G35600 Oryza meridionalis OMERI02G35600 I 0.964
BRADI2G46320 Brachypodium distachyon BRADI2G46320 N 0.944
BGIOSGA001035 Oryza indica BGIOSGA001035 N 0.930
Lus10025406.g Linum usitatissimum Lus10025406.g N 0.879
OS01G0674000 Oryza sativa OS01G0674000 N 0.930
Lus10007273.g Linum usitatissimum Lus10007273.g N 0.869
TRAES3BF009800030CFD_g Triticum aestivum TRAES3BF009800030CFD_g N 0.936
ORGLA01G0214300 Oryza glaberrima ORGLA01G0214300 N 0.930
OPUNC01G26130 Oryza punctata OPUNC01G26130 N 0.938
ONIVA01G29560 Oryza nivara ONIVA01G29560 N 0.930
OMERI01G23900 Oryza meridionalis OMERI01G23900 N 0.930
LPERR01G22430 Leersia perrieri LPERR01G22430 N 0.938
OGLUM01G30050 Oryza glumaepatula OGLUM01G30050 N 0.930
gene21007-v1.0-hybrid Fragaria vesca gene21007-v1.0-hybrid N 0.828
GRMZM2G023119 Zea mays GRMZM2G023119 N 0.921
TCM_042467 Theobroma cacao TCM_042467 N 0.847