Si022565m.g (Setaria italica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Si022565m.g T249818_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G58630
M06976_2.00
Arabidopsis thaliana
HNTCGCCGGARWHDN

NHDWYTCCGGCGAND
Dap-seq
OMalley et al.(2016)
AT3G58630_col_a
0.838 0.662
AT3G58630
M06977_2.00
Arabidopsis thaliana
NNTCGCCGGARWHDN

NHDWYTCCGGCGANN
Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a
0.838 0.662
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si022565m MADF 48 125

Links

Other MADF family TFs
Other Setaria italica TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ALNC14_036360 Albugo laibachii ALNC14_036360 N 0.000
estExt_Genewise1.C_160059 Phytophthora capsici estExt_Genewise1.C_160059 N 0.000
estExt_Genewise1Plus.C_470032 Phytophthora capsici estExt_Genewise1Plus.C_470032 N 0.000
F443_05707 Phytophthora parasitica F443_05707 N 0.000
F443_21644 Phytophthora parasitica F443_21644 N 0.000
fgenesh_scip_prom.28083.10584 Phytophthora lateralis fgenesh_scip_prom.28083.10584 N 0.000
fgenesh_scip_prom.28083.905 Phytophthora lateralis fgenesh_scip_prom.28083.905 N 0.000
fgenesh_scip_prom.46568.8980 Phytophthora kernoviae fgenesh_scip_prom.46568.8980 N 0.000
HpaG801617 Hyaloperonospora arabidopsidis HpaG801617 N 0.000
maker-pag1_scaffold_1181-snap-gene-0.1 Pythium aphanidermatum maker-pag1_scaffold_1181-snap-gene-0.1 N 0.000
maker-par_contig_2427-snap-gene-0.2 Pythium arrhenomanes maker-par_contig_2427-snap-gene-0.2 N 0.000
maker-pir_contig_139-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_139-fgenesh-gene-0.3 N 0.000
maker-piw_contig_2063-fgenesh-gene-0.0 Pythium iwayamai maker-piw_contig_2063-fgenesh-gene-0.0 N 0.000
maker-piw_contig_701-snap-gene-0.10 Pythium iwayamai maker-piw_contig_701-snap-gene-0.10 N 0.000
maker-pve_contig_1590-snap-gene-0.1 Pythium vexans maker-pve_contig_1590-snap-gene-0.1 N 0.000
maker-pve_contig_30-snap-gene-0.60 Pythium vexans maker-pve_contig_30-snap-gene-0.60 N 0.000
Phyra79700 Phytophthora ramorum Phyra79700 N 0.000
Phyra96342 Phytophthora ramorum Phyra96342 N 0.000
Physo127211 Phytophthora sojae Physo127211 N 0.000
Physo132833 Phytophthora sojae Physo132833 N 0.000
PITG_01056 Phytophthora infestans PITG_01056 N 0.000
PYU1_G000095 Pythium ultimum PYU1_G000095 N 0.000
PYU1_G001814 Pythium ultimum PYU1_G001814 N 0.000
SPRG_07305 Saprolegnia parasitica SPRG_07305 N 0.000
SPRG_08919 Saprolegnia parasitica SPRG_08919 N 0.000