Si033157m.g (Setaria italica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Si033157m.g T249820_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS02G0104500
M02271_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH8719 		0.942 0.879
OS02G0104500
M02272_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH9273 		0.942 0.879
PK15172.1
M01263_2.00 		Cannabis sativa
NNNGTWAHWN
NWDTWACNNN		 PBM
Lambert et al.(2019)
pTH10125 		0.865 0.682
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si033157m MADF 116 184

Links

Other MADF family TFs
Other Setaria italica TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ab00054 Panicum virgatum Pavir.Ab00054 I 0.959
Sb04g000520 Sorghum bicolor Sb04g000520 I 0.959
GRMZM2G037128 Zea mays GRMZM2G037128 I 0.959
Pavir.Aa03569 Panicum virgatum Pavir.Aa03569 I 0.959
GRMZM2G111760 Zea mays GRMZM2G111760 I 0.953
OB02G10400 Oryza brachyantha OB02G10400 I 0.944
OGLUM02G00360 Oryza glumaepatula OGLUM02G00360 I 0.942
OMERI02G09240 Oryza meridionalis OMERI02G09240 I 0.942
OBART02G00380 Oryza barthii OBART02G00380 I 0.942
ORUFI02G00410 Oryza rufipogon ORUFI02G00410 I 0.942
BGIOSGA007300 Oryza indica BGIOSGA007300 I 0.942
OS02G0104500 Oryza sativa OS02G0104500 D 0.942
ORGLA02G0003500 Oryza glaberrima ORGLA02G0003500 I 0.942
ONIVA02G00390 Oryza nivara ONIVA02G00390 I 0.942
OPUNC02G00050 Oryza punctata OPUNC02G00050 I 0.942
GSMUA_Achr7G04610_001 Musa acuminata GSMUA_Achr7G04610_001 I 0.939
orange1.1g009174m.g Citrus sinensis orange1.1g009174m.g I 0.939
POPTR_0006s23800 Populus trichocarpa POPTR_0006s23800 I 0.939
29739.m003611 Ricinus communis 29739.m003611 I 0.939
SapurV1A.0710s0040 Salix purpurea SapurV1A.0710s0040 I 0.939
Ciclev10010595m.g Citrus clementina Ciclev10010595m.g I 0.939
LPERR02G00380 Leersia perrieri LPERR02G00380 I 0.938
cassava25125.valid.m1 Manihot esculenta cassava25125.valid.m1 I 0.934
POPTR_0018s05540 Populus trichocarpa POPTR_0018s05540 I 0.932
SapurV1A.0435s0090 Salix purpurea SapurV1A.0435s0090 I 0.932
POPTR_0018s05520 Populus trichocarpa POPTR_0018s05520 I 0.932
POPTR_0310s00200 Populus trichocarpa POPTR_0310s00200 I 0.932
TRIUR3_30093 Triticum urartu TRIUR3_30093 I 0.928
BRADI3G00697 Brachypodium distachyon BRADI3G00697 I 0.928
Traes_6AS_52AE4A6E2 Triticum aestivum Traes_6AS_52AE4A6E2 I 0.928
GSMUA_AchrUn_randomG03020_001 Musa acuminata GSMUA_AchrUn_randomG03020_001 I 0.925
VIT_04s0008g01850 Vitis vinifera VIT_04s0008g01850 I 0.923
MLOC_25460 Hordeum vulgare MLOC_25460 I 0.921
Gorai.010G096900 Gossypium raimondii Gorai.010G096900 I 0.908
GSMUA_Achr1G24120_001 Musa acuminata GSMUA_Achr1G24120_001 I 0.907
evm.TU.supercontig_126.31 Carica papaya evm.TU.supercontig_126.31 I 0.905
TCM_037381 Theobroma cacao TCM_037381 I 0.899
gene15385-v1.0-hybrid Fragaria vesca gene15385-v1.0-hybrid I 0.895
ORGLA04G0173400 Oryza glaberrima ORGLA04G0173400 I 0.890
Pavir.Ga00673 Panicum virgatum Pavir.Ga00673 I 0.889
Eucgr.D02541 Eucalyptus grandis Eucgr.D02541 I 0.888
MDP0000122269 Malus domestica MDP0000122269 I 0.880
Traes_1DL_772D1D7DF Triticum aestivum Traes_1DL_772D1D7DF I 0.880
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.880
MLOC_14207 Hordeum vulgare MLOC_14207 I 0.879
Traes_1AL_ED83D13D4 Triticum aestivum Traes_1AL_ED83D13D4 I 0.879
PK15172.1 Cannabis sativa PK15172.1 D 0.865
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.864
TRIUR3_29570 Triticum urartu TRIUR3_29570 I 0.864
Gorai.001G020300 Gossypium raimondii Gorai.001G020300 I 0.862
evm.TU.supercontig_21.195 Carica papaya evm.TU.supercontig_21.195 I 0.859
Bo6g083670 Brassica oleracea Bo6g083670 I 0.859
BGIOSGA011584 Oryza indica BGIOSGA011584 I 0.858
PK14727.1 Cannabis sativa PK14727.1 I 0.858
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.855
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.854
Lus10028584.g Linum usitatissimum Lus10028584.g I 0.851
Aquca_023_00132 Aquilegia coerulea Aquca_023_00132 I 0.842
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.841
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.826
Traes_4DL_DC6A55EEE Triticum aestivum Traes_4DL_DC6A55EEE I 0.826
Pavir.J25029 Panicum virgatum Pavir.J25029 I 0.825
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.816
Pavir.Ib03751 Panicum virgatum Pavir.Ib03751 I 0.815
LjSGA_134698.1 Lotus japonicus LjSGA_134698.1 I 0.815
LjSGA_034643.2 Lotus japonicus LjSGA_034643.2 I 0.815