Si034382m.g (Setaria italica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Si034382m.g T249821_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT-GTL1
M06968_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_col_a
0.910 0.761
AT-GTL1
M06969_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_colamp_a
0.910 0.761
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si034382m MADF 90 161
Si034382m MADF 475 546
Si034384m MADF 90 161
Si034384m MADF 475 546

Links

Other MADF family TFs
Other Setaria italica TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.910
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.866
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.944
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.944
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.891
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.885
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.886
30206.m000769 Ricinus communis 30206.m000769 I 0.877
30068.m002635 Ricinus communis 30068.m002635 I 0.944
29576.m000223 Ricinus communis 29576.m000223 I 0.883
Pm024289 Prunus mume Pm024289 I 0.952
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.944
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.885
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.942
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.875
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.862
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.950
mgf021983m Mimulus guttatus mgf021983m I 0.866
mgf004276m Mimulus guttatus mgf004276m I 0.928
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.920
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.927
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.848
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.867
Pm022572 Prunus mume Pm022572 I 0.882
Pm022570 Prunus mume Pm022570 I 0.885
Pm001889 Prunus mume Pm001889 I 0.840
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.937
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.932
TCM_035571 Theobroma cacao TCM_035571 I 0.870
TCM_035565 Theobroma cacao TCM_035565 I 0.883
TCM_015563 Theobroma cacao TCM_015563 I 0.950
TCM_001348 Theobroma cacao TCM_001348 I 0.865
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.909
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.872
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.945
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.932
TRIUR3_33826 Triticum urartu TRIUR3_33826 I 0.899
Cla007910 Citrullus lanatus Cla007910 I 0.855
Cla005046 Citrullus lanatus Cla005046 I 0.949
Cla001992 Citrullus lanatus Cla001992 I 0.867
Ca_25135 Cicer arietinum Ca_25135 I 0.859
Ca_04386 Cicer arietinum Ca_04386 I 0.867
Ca_04385 Cicer arietinum Ca_04385 I 0.871
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.906
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.847
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.944
Si016578m.g Setaria italica Si016578m.g I 0.914
PK26613.1 Cannabis sativa PK26613.1 I 0.861
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.960
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.965
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.950
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.925
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.893
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.894
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.874
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.948
MDP0000701272 Malus domestica MDP0000701272 I 0.945
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.945
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.891
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.866
PK24122.1 Cannabis sativa PK24122.1 I 0.867
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.862
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.917
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.881
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.879
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.902
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.881
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.947
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.875
MDP0000451107 Malus domestica MDP0000451107 I 0.882
MDP0000451038 Malus domestica MDP0000451038 I 0.949
MDP0000156139 Malus domestica MDP0000156139 I 0.887
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.889
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.893
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.948
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.894
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.874
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.862
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.866
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.913
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.906
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.879
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.936
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.941
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.867
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.874
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.843
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.941
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.847
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.945
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.884
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.888
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.885
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.862
Si012121m.g Setaria italica Si012121m.g I 0.955
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.861
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I 0.897
GSMUA_Achr1G04100_001 Musa acuminata GSMUA_Achr1G04100_001 I 0.885
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.924
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.932
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.914
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.912
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.959
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.867
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.877
GSMUA_Achr4G24780_001 Musa acuminata GSMUA_Achr4G24780_001 I 0.883
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.959
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.877
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.932
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.945
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.942
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.929
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.958
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.958
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.919
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I 0.913
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.867
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.896
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.871
Bo8g027460 Brassica oleracea Bo8g027460 I 0.868
Bo6g120870 Brassica oleracea Bo6g120870 I 0.862
Bo6g083690 Brassica oleracea Bo6g083690 I 0.862
Bo6g049430 Brassica oleracea Bo6g049430 I 0.913
Bo2g091240 Brassica oleracea Bo2g091240 I 0.853
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.934
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.953
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.936
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.944
Bra003702 Brassica rapa Bra003702 I 0.835
Bra003703 Brassica rapa Bra003703 I 0.862
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.910
F775_26337 Aegilops tauschii F775_26337 I 0.945
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.949
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.924
BRADI1G77610 Brachypodium distachyon BRADI1G77610 I 0.945
Bra040010 Brassica rapa Bra040010 I 0.913
Bra036731 Brassica rapa Bra036731 I 0.868
Bra015716 Brassica rapa Bra015716 I 0.862
Bra008285 Brassica rapa Bra008285 I 0.871
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.931
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.855
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.905
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.949
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.907
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.883
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.889
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.900
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.952
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.872
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.934
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.953
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.889
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.952
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.877
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.877
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.905
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.862
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.959
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.926
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.939
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.867
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.882
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.875
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.964
OB02G33250 Oryza brachyantha OB02G33250 I 0.938
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.934
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.960
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.951
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.934
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.953
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.960
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.936
OBART04G20290 Oryza barthii OBART04G20290 I 0.953
OBART02G25970 Oryza barthii OBART02G25970 I 0.930
OB04G27270 Oryza brachyantha OB04G27270 I 0.955
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.964
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.953
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.936
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.936
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.956
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.930
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.941
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.955
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.929
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.934
F775_24861 Aegilops tauschii F775_24861 N 0.902
GLYMA06G15500 Glycine max GLYMA06G15500 N 0.825
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.822
mgf018892m Mimulus guttatus mgf018892m N 0.851
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.822