Si036121m.g (Setaria italica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Si036121m.g T249822_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS04G0486400
M02273_2.00 		Oryza sativa
YTAACYNNNN
NNNNRGTTAR		 PBM
Weirauch et al.(2014)
pTH9338 		0.970 0.887
GT-1
M02274_2.00 		Arabidopsis lyrata
GGTTAACC
GGTTAACC		 PBM
Weirauch et al.(2014)
pTH9235 		0.949 0.606
GT-1
M02263_2.00 		Arabidopsis thaliana
KTTAACCM
KGGTTAAM		 PBM
Weirauch et al.(2014)
pTH8149 		0.945 0.634
GT-1
M10896_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GT1_Q6_02 		0.945 0.634
GT-1
M10897_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GT1_Q6 		0.945 0.634
MTR_3g085960
M02270_2.00 		Medicago truncatula
NWAACYNNNN
NNNNRGTTWN		 PBM
Weirauch et al.(2014)
pTH9208 		0.939 0.549
MDP0000164819
M02280_2.00 		Malus domestica
YTAACYVNNN
NNNBRGTTAR		 PBM
Weirauch et al.(2014)
pTH9204 		0.933 0.634
GT-4
M02265_2.00 		Arabidopsis thaliana
NHDACHNNNN
NNNNDGTHDN		 PBM
Weirauch et al.(2014)
pTH7910 		0.924 0.549
GT-4
M06974_2.00 		Arabidopsis thaliana
AACCATGGTTAADWYWWWWHH
DDWWWWRWHTTAACCATGGTT		 Dap-seq
OMalley et al.(2016)
AT3G25990_col_a 		0.924 0.549
GT-4
M06975_2.00 		Arabidopsis thaliana
WWMNYTAACYVWRRTTADNH
DNHTAAYYWBRGTTARNKWW		 Dap-seq
OMalley et al.(2016)
AT3G25990_colamp_a 		0.924 0.549
GLYMA11G37390
M02269_2.00 		Glycine max
BWDACYNNNN
NNNNRGTHWV		 PBM
Weirauch et al.(2014)
pTH9183 		0.908 0.535
PK20543.1
M01264_2.00 		Cannabis sativa
YTAACYNNNN
NNNNRGTTAR		 PBM
Lambert et al.(2019)
pTH11253 		0.906 0.620
cassava13991.valid.m1
M02279_2.00 		Manihot esculenta
NNDACHNNNN
NNNNDGTHNN		 PBM
Weirauch et al.(2014)
pTH9206 		0.898 0.634
29929.m004704
M02278_2.00 		Ricinus communis
NDNDHDHNHN
NDNDHDHNHN		 PBM
Weirauch et al.(2014)
pTH9339 		0.896 0.634
fgenesh2_kg.5__353__AT3G25990.1
M02268_2.00 		Arabidopsis lyrata
NNNHAACCCCYNN
NNRGGGGTTDNNN		 PBM
Weirauch et al.(2014)
pTH9228 		0.896 0.563
VIT_17s0000g10420
M02275_2.00 		Vitis vinifera
GTTAACYV
BRGTTAAC		 PBM
Weirauch et al.(2014)
pTH9293 		0.857 0.493
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si036121m MADF 63 139

Links

Other MADF family TFs
Other Setaria italica TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OS04G0486400 Oryza sativa OS04G0486400 D 0.970
Si010147m.g Setaria italica Si010147m.g I 0.968
GRMZM2G047370 Zea mays GRMZM2G047370 I 0.967
MLOC_64014 Hordeum vulgare MLOC_64014 I 0.966
Pavir.Ga01561 Panicum virgatum Pavir.Ga01561 I 0.955
OB04G23970 Oryza brachyantha OB04G23970 I 0.951
evm.TU.supercontig_130.35 Carica papaya evm.TU.supercontig_130.35 I 0.950
GT-1 Arabidopsis lyrata scaffold_101505.1 D 0.949
Bra019721 Brassica rapa Bra019721 I 0.945
Thhalv10007959m.g Eutrema salsugineum Thhalv10007959m.g I 0.945
GT-1 Arabidopsis thaliana AT1G13450 D 0.945
Bo5g017510 Brassica oleracea Bo5g017510 I 0.945
Bostr.13671s0104 Boechera stricta Bostr.13671s0104 I 0.945
Cagra.3501s0157 Capsella grandiflora Cagra.3501s0157 I 0.945
PRUPE_ppa009404mg Prunus persica PRUPE_ppa009404mg I 0.945
Bra026903 Brassica rapa Bra026903 I 0.945
Carubv10009313m.g Capsella rubella Carubv10009313m.g I 0.945
PDK_20s1345831g002 Phoenix dactylifera PDK_20s1345831g002 I 0.939
MTR_3g085960 Medicago truncatula MTR_3g085960 D 0.939
LjT04G17.70.nc Lotus japonicus LjT04G17.70.nc I 0.939
Cla023054 Citrullus lanatus Cla023054 I 0.938
MDP0000164819 Malus domestica MDP0000164819 D 0.933
Pm006885 Prunus mume Pm006885 I 0.933
Cucsa.394820 Cucumis sativus Cucsa.394820 I 0.932
AMTR_s00005p00185670 Amborella trichopoda AMTR_s00005p00185670 I 0.929
SapurV1A.0206s0170 Salix purpurea SapurV1A.0206s0170 I 0.925
GT-4 Arabidopsis thaliana AT3G25990 D 0.924
Gorai.009G333800 Gossypium raimondii Gorai.009G333800 I 0.924
TCM_010751 Theobroma cacao TCM_010751 I 0.924
Eucgr.J02286 Eucalyptus grandis Eucgr.J02286 I 0.923
GSMUA_Achr3G19370_001 Musa acuminata GSMUA_Achr3G19370_001 I 0.917
AMTR_s00055p00209070 Amborella trichopoda AMTR_s00055p00209070 I 0.917
POPTR_0008s17980 Populus trichocarpa POPTR_0008s17980 I 0.916
Bo8g107400 Brassica oleracea Bo8g107400 I 0.915
VIT_14s0171g00450 Vitis vinifera VIT_14s0171g00450 I 0.909
Gorai.008G163200 Gossypium raimondii Gorai.008G163200 I 0.908
GLYMA11G37390 Glycine max GLYMA11G37390 D 0.908
PK20543.1 Cannabis sativa PK20543.1 D 0.906
GLYMA18G01360 Glycine max GLYMA18G01360 I 0.906
VIT_01s0010g02420 Vitis vinifera VIT_01s0010g02420 I 0.906
Thhalv10004359m.g Eutrema salsugineum Thhalv10004359m.g I 0.903
Solyc12g077540.1 Solanum lycopersicum Solyc12g077540.1 I 0.899
Carubv10017413m.g Capsella rubella Carubv10017413m.g I 0.898
SapurV1A.1719s0020 Salix purpurea SapurV1A.1719s0020 I 0.898
evm.TU.supercontig_1453.1 Carica papaya evm.TU.supercontig_1453.1 I 0.898
Eucgr.B03456 Eucalyptus grandis Eucgr.B03456 I 0.898
Cagra.6197s0012 Capsella grandiflora Cagra.6197s0012 I 0.898
POPTR_0010s06510 Populus trichocarpa POPTR_0010s06510 I 0.898
cassava13991.valid.m1 Manihot esculenta cassava13991.valid.m1 D 0.898
Ca_11315 Cicer arietinum Ca_11315 I 0.898
cassava11841.valid.m1 Manihot esculenta cassava11841.valid.m1 I 0.898
Bostr.0556s0275 Boechera stricta Bostr.0556s0275 I 0.897
29929.m004704 Ricinus communis 29929.m004704 D 0.896
fgenesh2_kg.5__353__AT3G25990.1 Arabidopsis lyrata fgenesh2_kg.5__353__AT3G25990.1 D 0.896
mgf016368m Mimulus guttatus mgf016368m I 0.891
Aquca_011_00297 Aquilegia coerulea Aquca_011_00297 I 0.888
orange1.1g015940m.g Citrus sinensis orange1.1g015940m.g I 0.886
MDP0000275412 Malus domestica MDP0000275412 I 0.886
Ciclev10031750m.g Citrus clementina Ciclev10031750m.g I 0.886
Aquca_123_00031 Aquilegia coerulea Aquca_123_00031 I 0.886
Bo2g138840 Brassica oleracea Bo2g138840 I 0.885
Bra036354 Brassica rapa Bra036354 I 0.885
Pm016214 Prunus mume Pm016214 I 0.881
PRUPE_ppa005942mg Prunus persica PRUPE_ppa005942mg I 0.881
Lus10036978.g Linum usitatissimum Lus10036978.g I 0.878
Lus10015824.g Linum usitatissimum Lus10015824.g I 0.873
GSMUA_Achr5G17240_001 Musa acuminata GSMUA_Achr5G17240_001 I 0.871
VIT_17s0000g10420 Vitis vinifera VIT_17s0000g10420 D 0.857