VIT_18s0072g00670 (Vitis vinifera)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 VIT_18s0072g00670 T250009_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT-GTL1
M06968_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_col_a
0.884 0.710
AT-GTL1
M06969_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_colamp_a
0.884 0.710
AT1G76880
M06970_2.00
Arabidopsis thaliana
RHRGTAAAAWNDDDWW

WWHHHNWTTTTACYDY
Dap-seq
OMalley et al.(2016)
AT1G76880_col_a
0.848 0.710
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_18s0072g00670.t01 MADF 75 145
VIT_18s0072g00670.t01 MADF 404 476

Links

Other MADF family TFs
Other Vitis vinifera TFs

Invalid Input OrderBy

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action