madf-4 (Caenorhabditis elegans)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 WBGene00011575 T250013_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be part of transcription regulator complex. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
madf-4
M00683_2.00		 Caenorhabditis elegans
NDNCGYANN
NNTRCGNHN		 PBM
Narasimhan et al.(2015)
pTH9096		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.812 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00683_2.00 MADF 22 106

DNA Binding Domains

Protein ID Domain From To Sequence
T07C12.11 MADF 22 106

Links

Other MADF family TFs
Other Caenorhabditis elegans TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE06058 Caenorhabditis remanei CRE06058 I 0.966
CBG19420 Caenorhabditis briggsae CBG19420 I 0.941
CBN22408 Caenorhabditis brenneri CBN22408 I 0.938
CBN05962 Caenorhabditis brenneri CBN05962 I 0.938
CJA40670 Caenorhabditis japonica CJA40670 I 0.927
CJA07373 Caenorhabditis japonica CJA07373 I 0.927