madf-9 (Caenorhabditis elegans)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 WBGene00022608 T250021_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be part of transcription regulator complex. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
madf-9
M02277_2.00		 Caenorhabditis elegans
VYGCGGAH
DTCCGCRB		 PBM
Weirauch et al.(2014)
pTH8333		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG08311
M02267_2.00 		Caenorhabditis briggsae
RCGCGGAM
KTCCGCGY		 PBM
Weirauch et al.(2014)
pTH9393 		0.969 0.949
For this family, TFs with SR scores > 0.812 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02277_2.00 MADF 51 129

DNA Binding Domains

Protein ID Domain From To Sequence
ZC416.1 MADF 53 131

Links

Other MADF family TFs
Other Caenorhabditis elegans TFs

Invalid Input OrderBy

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action