Pm016214 (Prunus mume)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Pm016214 T250415_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK20543.1
M01264_2.00
Cannabis sativa
YTAACYNNNN

NNNNRGTTAR
PBM
Lambert et al.(2019)
pTH11253
0.951 0.926
cassava13991.valid.m1
M02279_2.00
Manihot esculenta
NNDACHNNNN

NNNNDGTHNN
PBM
Weirauch et al.(2014)
pTH9206
0.926 0.662
GLYMA11G37390
M02269_2.00
Glycine max
BWDACYNNNN

NNNNRGTHWV
PBM
Weirauch et al.(2014)
pTH9183
0.924 0.529
fgenesh2_kg.5__353__AT3G25990.1
M02268_2.00
Arabidopsis lyrata
NNNHAACCCCYNN

NNRGGGGTTDNNN
PBM
Weirauch et al.(2014)
pTH9228
0.915 0.574
29929.m004704
M02278_2.00
Ricinus communis
NDNDHDHNHN

NDNDHDHNHN
PBM
Weirauch et al.(2014)
pTH9339
0.910 0.647
MDP0000164819
M02280_2.00
Malus domestica
YTAACYVNNN

NNNBRGTTAR
PBM
Weirauch et al.(2014)
pTH9204
0.888 0.647
GT-1
M02274_2.00
Arabidopsis lyrata
GGTTAACC

GGTTAACC
PBM
Weirauch et al.(2014)
pTH9235
0.888 0.632
MTR_3g085960
M02270_2.00
Medicago truncatula
NWAACYNNNN

NNNNRGTTWN
PBM
Weirauch et al.(2014)
pTH9208
0.886 0.574
OS04G0486400
M02273_2.00
Oryza sativa
YTAACYNNNN

NNNNRGTTAR
PBM
Weirauch et al.(2014)
pTH9338
0.882 0.632
GT-1
M02263_2.00
Arabidopsis thaliana
KTTAACCM

KGGTTAAM
PBM
Weirauch et al.(2014)
pTH8149
0.877 0.632
GT-1
M10896_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GT1_Q6_02
0.877 0.632
GT-1
M10897_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GT1_Q6
0.877 0.632
GT-4
M02265_2.00
Arabidopsis thaliana
NHDACHNNNN

NNNNDGTHDN
PBM
Weirauch et al.(2014)
pTH7910
0.860 0.544
GT-4
M06974_2.00
Arabidopsis thaliana
AACCATGGTTAADWYWWWWHH

DDWWWWRWHTTAACCATGGTT
Dap-seq
OMalley et al.(2016)
AT3G25990_col_a
0.860 0.544
GT-4
M06975_2.00
Arabidopsis thaliana
WWMNYTAACYVWRRTTADNH

DNHTAAYYWBRGTTARNKWW
Dap-seq
OMalley et al.(2016)
AT3G25990_colamp_a
0.860 0.544
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm016214 MADF 121 191

Links

Other MADF family TFs
Other Prunus mume TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00005p00185670 Amborella trichopoda AMTR_s00005p00185670 I 0.869
AMTR_s00055p00209070 Amborella trichopoda AMTR_s00055p00209070 I 0.917
Aquca_011_00297 Aquilegia coerulea Aquca_011_00297 I 0.918
Aquca_123_00031 Aquilegia coerulea Aquca_123_00031 I 0.901
fgenesh2_kg.5__353__AT3G25990.1 Arabidopsis lyrata fgenesh2_kg.5__353__AT3G25990.1 D 0.915
GT-1 Arabidopsis lyrata scaffold_101505.1 D 0.888
GT-1 Arabidopsis thaliana AT1G13450 D 0.888
GT-4 Arabidopsis thaliana AT3G25990 D 0.860
Bostr.13671s0104 Boechera stricta Bostr.13671s0104 I 0.898
Bostr.0556s0275 Boechera stricta Bostr.0556s0275 I 0.937
Bo2g138840 Brassica oleracea Bo2g138840 I 0.838
Bo5g017510 Brassica oleracea Bo5g017510 I 0.878
Bo8g107400 Brassica oleracea Bo8g107400 I 0.890
Bra036354 Brassica rapa Bra036354 I 0.838
Bra019721 Brassica rapa Bra019721 I 0.878
Bra026903 Brassica rapa Bra026903 I 0.890
PK20543.1 Cannabis sativa PK20543.1 D 0.951
Cagra.6197s0012 Capsella grandiflora Cagra.6197s0012 I 0.917
Cagra.3501s0157 Capsella grandiflora Cagra.3501s0157 I 0.897
Carubv10009313m.g Capsella rubella Carubv10009313m.g I 0.897
Carubv10017413m.g Capsella rubella Carubv10017413m.g I 0.917
evm.TU.supercontig_130.35 Carica papaya evm.TU.supercontig_130.35 I 0.906
evm.TU.supercontig_1453.1 Carica papaya evm.TU.supercontig_1453.1 I 0.925
Ca_11315 Cicer arietinum Ca_11315 I 0.924
Cla023054 Citrullus lanatus Cla023054 I 0.886
Ciclev10031750m.g Citrus clementina Ciclev10031750m.g I 0.916
orange1.1g015940m.g Citrus sinensis orange1.1g015940m.g I 0.916
Cucsa.394820 Cucumis sativus Cucsa.394820 I 0.875
Eucgr.J02286 Eucalyptus grandis Eucgr.J02286 I 0.920
Eucgr.B03456 Eucalyptus grandis Eucgr.B03456 I 0.915
Thhalv10007959m.g Eutrema salsugineum Thhalv10007959m.g I 0.898
Thhalv10004359m.g Eutrema salsugineum Thhalv10004359m.g I 0.910
GLYMA18G01360 Glycine max GLYMA18G01360 I 0.924
GLYMA11G37390 Glycine max GLYMA11G37390 D 0.924
Gorai.009G333800 Gossypium raimondii Gorai.009G333800 I 0.934
Gorai.008G163200 Gossypium raimondii Gorai.008G163200 I 0.926
MLOC_64014 Hordeum vulgare MLOC_64014 I 0.895
Lus10015824.g Linum usitatissimum Lus10015824.g I 0.909
Lus10036978.g Linum usitatissimum Lus10036978.g I 0.905
LjT04G17.70.nc Lotus japonicus LjT04G17.70.nc I 0.886
MDP0000164819 Malus domestica MDP0000164819 D 0.888
MDP0000275412 Malus domestica MDP0000275412 I 0.970
cassava13991.valid.m1 Manihot esculenta cassava13991.valid.m1 D 0.926
cassava11841.valid.m1 Manihot esculenta cassava11841.valid.m1 I 0.926
MTR_3g085960 Medicago truncatula MTR_3g085960 D 0.886
mgf016368m Mimulus guttatus mgf016368m I 0.880
GSMUA_Achr5G17240_001 Musa acuminata GSMUA_Achr5G17240_001 I 0.935
GSMUA_Achr3G19370_001 Musa acuminata GSMUA_Achr3G19370_001 I 0.944
OB04G23970 Oryza brachyantha OB04G23970 I 0.876
OS04G0486400 Oryza sativa OS04G0486400 D 0.882
Pavir.Ga01561 Panicum virgatum Pavir.Ga01561 I 0.882
PDK_20s1345831g002 Phoenix dactylifera PDK_20s1345831g002 I 0.905
POPTR_0008s17980 Populus trichocarpa POPTR_0008s17980 I 0.927
POPTR_0010s06510 Populus trichocarpa POPTR_0010s06510 I 0.888
Pm006885 Prunus mume Pm006885 I 0.888
PRUPE_ppa009404mg Prunus persica PRUPE_ppa009404mg I 0.914
PRUPE_ppa005942mg Prunus persica PRUPE_ppa005942mg I 0.971
29929.m004704 Ricinus communis 29929.m004704 D 0.910
SapurV1A.0206s0170 Salix purpurea SapurV1A.0206s0170 I 0.925
SapurV1A.1719s0020 Salix purpurea SapurV1A.1719s0020 I 0.912
Si010147m.g Setaria italica Si010147m.g I 0.871
Si036121m.g Setaria italica Si036121m.g I 0.881
Solyc12g077540.1 Solanum lycopersicum Solyc12g077540.1 I 0.914
TCM_010751 Theobroma cacao TCM_010751 I 0.934
VIT_14s0171g00450 Vitis vinifera VIT_14s0171g00450 I 0.943
VIT_01s0010g02420 Vitis vinifera VIT_01s0010g02420 I 0.924
GRMZM2G047370 Zea mays GRMZM2G047370 I 0.882