Pm022570 (Prunus mume)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Pm022570 T250419_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT-GTL1
M06968_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_col_a
0.894 0.667
AT-GTL1
M06969_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_colamp_a
0.894 0.667
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm022570 MADF 80 150
Pm022570 MADF 427 499

Links

Other MADF family TFs
Other Prunus mume TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.894
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.910
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.847
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.882
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.882
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.882
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.943
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.925
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.924
30206.m000769 Ricinus communis 30206.m000769 I 0.929
30068.m002635 Ricinus communis 30068.m002635 I 0.877
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.862
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.908
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.917
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.930
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.910
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.900
mgf021983m Mimulus guttatus mgf021983m I 0.894
mgf004276m Mimulus guttatus mgf004276m I 0.876
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.862
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.862
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.903
29576.m000223 Ricinus communis 29576.m000223 I 0.907
Pm024289 Prunus mume Pm024289 I 0.894
Pm022572 Prunus mume Pm022572 I 0.921
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.868
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.879
TCM_035571 Theobroma cacao TCM_035571 I 0.905
TCM_035565 Theobroma cacao TCM_035565 I 0.898
TCM_015563 Theobroma cacao TCM_015563 I 0.888
TCM_001348 Theobroma cacao TCM_001348 I 0.919
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.915
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.880
Si034382m.g Setaria italica Si034382m.g I 0.885
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.868
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.879
Cla007910 Citrullus lanatus Cla007910 I 0.909
Cla005046 Citrullus lanatus Cla005046 I 0.877
Cla001992 Citrullus lanatus Cla001992 I 0.907
Ca_25135 Cicer arietinum Ca_25135 I 0.907
Ca_04386 Cicer arietinum Ca_04386 I 0.893
Ca_04385 Cicer arietinum Ca_04385 I 0.901
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.939
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.906
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.889
Si016578m.g Setaria italica Si016578m.g I 0.885
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.889
PK26613.1 Cannabis sativa PK26613.1 I 0.898
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.886
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.844
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.882
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.899
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.891
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.929
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.916
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.893
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.886
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.902
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.882
PK24122.1 Cannabis sativa PK24122.1 I 0.902
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.910
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.903
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.893
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.889
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.916
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.893
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.894
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.925
MDP0000701272 Malus domestica MDP0000701272 I 0.891
MDP0000451107 Malus domestica MDP0000451107 I 0.920
MDP0000451038 Malus domestica MDP0000451038 I 0.886
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.864
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.928
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.914
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.929
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.886
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.916
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.893
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.910
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.917
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.873
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.965
MDP0000156139 Malus domestica MDP0000156139 I 0.923
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.916
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.901
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.871
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.882
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.922
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.879
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.912
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.924
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.898
Si012121m.g Setaria italica Si012121m.g I 0.899
OB02G33250 Oryza brachyantha OB02G33250 I 0.894
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.880
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.859
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.906
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.888
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.864
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.890
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.915
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.920
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.915
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I 0.823
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.876
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.904
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.888
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.907
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.869
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.873
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.864
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.875
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.880
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.872
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.922
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.875
Bra003702 Brassica rapa Bra003702 I 0.874
Bo8g027460 Brassica oleracea Bo8g027460 I 0.926
Bo6g120870 Brassica oleracea Bo6g120870 I 0.910
Bo6g083690 Brassica oleracea Bo6g083690 I 0.910
Bo6g049430 Brassica oleracea Bo6g049430 I 0.898
Bo2g091240 Brassica oleracea Bo2g091240 I 0.908
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.885
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.891
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.890
Bra003703 Brassica rapa Bra003703 I 0.910
Bra008285 Brassica rapa Bra008285 I 0.900
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.924
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.894
F775_26337 Aegilops tauschii F775_26337 I 0.868
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.879
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.867
BRADI1G77610 Brachypodium distachyon BRADI1G77610 I 0.842
Bra040010 Brassica rapa Bra040010 I 0.898
Bra036731 Brassica rapa Bra036731 I 0.926
Bra015716 Brassica rapa Bra015716 I 0.910
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.878
OB04G27270 Oryza brachyantha OB04G27270 I 0.891
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.830
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.916
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.895
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.914
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.916
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.894
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.926
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.880
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.885
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.891
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.887
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.894
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.834
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.834
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.830
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.910
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.888
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.883
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.963
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.921
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.894
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.890
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.868
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.891
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.885
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.890
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.868
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.885
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.878
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.882
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.885
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.891
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.878
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.878
OBART02G25970 Oryza barthii OBART02G25970 I 0.881
OBART04G20290 Oryza barthii OBART04G20290 I 0.891
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.890
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.878
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.890
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.881
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.896
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.891
GLYMA06G15500 Glycine max GLYMA06G15500 N 0.891
mgf018892m Mimulus guttatus mgf018892m N 0.882
mgf015314m Mimulus guttatus mgf015314m N 0.862
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.900
gene18585-v1.0-hybrid Fragaria vesca gene18585-v1.0-hybrid N 0.849
F775_24861 Aegilops tauschii F775_24861 N 0.846
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.900
Lus10033504.g Linum usitatissimum Lus10033504.g N 0.859
Lus10020873.g Linum usitatissimum Lus10020873.g N 0.852
MDP0000424666 Malus domestica MDP0000424666 N 0.860