Pm024289 (Prunus mume)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Pm024289 T250421_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT-GTL1
M06968_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_col_a
0.911 0.809
AT-GTL1
M06969_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_colamp_a
0.911 0.809
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm024289 MADF 48 119
Pm024289 MADF 450 519

Links

Other MADF family TFs
Other Prunus mume TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.911
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.866
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.963
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.963
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.891
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.885
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.894
30206.m000769 Ricinus communis 30206.m000769 I 0.876
30068.m002635 Ricinus communis 30068.m002635 I 0.963
29576.m000223 Ricinus communis 29576.m000223 I 0.894
Pm022572 Prunus mume Pm022572 I 0.890
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.963
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.886
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.957
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.875
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.871
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.962
mgf021983m Mimulus guttatus mgf021983m I 0.875
mgf004276m Mimulus guttatus mgf004276m I 0.922
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.936
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.942
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.862
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.857
Pm022570 Prunus mume Pm022570 I 0.894
Pm001889 Prunus mume Pm001889 I 0.855
Cla007910 Citrullus lanatus Cla007910 I 0.869
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.943
TCM_035571 Theobroma cacao TCM_035571 I 0.882
TCM_035565 Theobroma cacao TCM_035565 I 0.883
TCM_015563 Theobroma cacao TCM_015563 I 0.967
TCM_001348 Theobroma cacao TCM_001348 I 0.878
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.909
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.872
Si034382m.g Setaria italica Si034382m.g I 0.952
Si016578m.g Setaria italica Si016578m.g I 0.906
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.953
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.959
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.943
Cla005046 Citrullus lanatus Cla005046 I 0.959
Cla001992 Citrullus lanatus Cla001992 I 0.857
Ca_25135 Cicer arietinum Ca_25135 I 0.859
Ca_04386 Cicer arietinum Ca_04386 I 0.872
Ca_04385 Cicer arietinum Ca_04385 I 0.859
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.906
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.861
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.964
TRIUR3_33826 Triticum urartu TRIUR3_33826 I 0.877
Si012121m.g Setaria italica Si012121m.g I 0.966
PK26613.1 Cannabis sativa PK26613.1 I 0.848
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.945
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.946
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.962
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.910
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.886
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.894
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.883
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.958
MDP0000701272 Malus domestica MDP0000701272 I 0.957
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.960
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.872
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.877
PK24122.1 Cannabis sativa PK24122.1 I 0.882
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.871
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.918
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.881
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.890
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.901
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.881
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.968
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.887
MDP0000451107 Malus domestica MDP0000451107 I 0.882
MDP0000451038 Malus domestica MDP0000451038 I 0.966
MDP0000156139 Malus domestica MDP0000156139 I 0.887
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.889
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.886
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.958
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.894
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.883
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.871
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.866
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.914
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.907
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.890
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.949
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.963
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.867
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.874
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.843
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.957
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.862
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.964
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.884
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.888
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.902
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.871
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.855
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I 0.906
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.931
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.934
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.915
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.896
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.963
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.867
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.877
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.867
GSMUA_Achr4G24780_001 Musa acuminata GSMUA_Achr4G24780_001 I 0.895
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.956
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I 0.930
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.861
GSMUA_Achr1G04100_001 Musa acuminata GSMUA_Achr1G04100_001 I 0.896
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.917
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.924
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.957
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.947
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.959
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.947
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.919
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.878
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.949
Bra003702 Brassica rapa Bra003702 I 0.841
Bo8g027460 Brassica oleracea Bo8g027460 I 0.868
Bo6g120870 Brassica oleracea Bo6g120870 I 0.871
Bo6g083690 Brassica oleracea Bo6g083690 I 0.871
Bo6g049430 Brassica oleracea Bo6g049430 I 0.913
Bo2g091240 Brassica oleracea Bo2g091240 I 0.854
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.951
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.961
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.930
Bra003703 Brassica rapa Bra003703 I 0.871
Bra008285 Brassica rapa Bra008285 I 0.859
Bra015716 Brassica rapa Bra015716 I 0.871
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.855
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.871
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.911
F775_26337 Aegilops tauschii F775_26337 I 0.959
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.956
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.943
BRADI1G77610 Brachypodium distachyon BRADI1G77610 I 0.925
Bra040010 Brassica rapa Bra040010 I 0.913
Bra036731 Brassica rapa Bra036731 I 0.868
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.950
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.914
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.883
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.898
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.882
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.971
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.887
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.872
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.951
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.961
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.954
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.890
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.966
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.900
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.906
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.906
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.914
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.871
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.911
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.941
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.878
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.890
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.971
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.963
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.930
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.950
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.954
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.951
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.960
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.951
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.961
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.950
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.930
OBART04G20290 Oryza barthii OBART04G20290 I 0.961
OB04G27270 Oryza brachyantha OB04G27270 I 0.963
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.961
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.944
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.923
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.951
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.963
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.930
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.951
OB02G33250 Oryza brachyantha OB02G33250 I 0.932
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.930
OBART02G25970 Oryza barthii OBART02G25970 I 0.923
mgf018892m Mimulus guttatus mgf018892m N 0.886
mgf015314m Mimulus guttatus mgf015314m N 0.818
Lus10033504.g Linum usitatissimum Lus10033504.g N 0.817
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.825
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.825
F775_24861 Aegilops tauschii F775_24861 N 0.878
GLYMA06G15500 Glycine max GLYMA06G15500 N 0.828