Pm026265 (Prunus mume)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Pm026265 T250422_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK04914.1
M01262_2.00
Cannabis sativa
DCCGTYAN

NTRACGGH
PBM
Lambert et al.(2019)
pTH10098
0.947 0.853
AT3G10030
M01258_2.00
Arabidopsis thaliana
NRMCGTTAWNN

NNWTAACGKYN
PBM
Lambert et al.(2019)
pTH11538
0.947 0.827
AT3G10030
M06971_2.00
Arabidopsis thaliana
HRHCKCCGTTANND

HNNTAACGGMGDYD
Dap-seq
OMalley et al.(2016)
AT3G10030_col_a
0.947 0.827
AT3G10030
M06972_2.00
Arabidopsis thaliana
HWRHMKCCGTTAAHD

HDTTAACGGMKDYWD
Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a
0.947 0.827
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm026265 MADF 152 234

Links

Other MADF family TFs
Other Prunus mume TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PRUPE_ppa004154mg Prunus persica PRUPE_ppa004154mg I 0.971
Ciclev10011433m.g Citrus clementina Ciclev10011433m.g I 0.958
VIT_08s0007g04160 Vitis vinifera VIT_08s0007g04160 I 0.958
Cucsa.378670 Cucumis sativus Cucsa.378670 I 0.958
Cla018015 Citrullus lanatus Cla018015 I 0.958
cassava30771.valid.m1 Manihot esculenta cassava30771.valid.m1 I 0.958
29815.m000504 Ricinus communis 29815.m000504 I 0.956
Eucgr.A01571 Eucalyptus grandis Eucgr.A01571 I 0.951
Aquca_019_00072 Aquilegia coerulea Aquca_019_00072 I 0.951
PGSC0003DMG400002727 Solanum tuberosum PGSC0003DMG400002727 I 0.950
GLYMA13G21371 Glycine max GLYMA13G21371 I 0.950
GLYMA10G07490 Glycine max GLYMA10G07490 I 0.950
AT3G10030 Arabidopsis thaliana AT3G10030 D 0.947
Bostr.22252s0062 Boechera stricta Bostr.22252s0062 I 0.947
PK04914.1 Cannabis sativa PK04914.1 D 0.947
fgenesh1_pm.C_scaffold_3000820 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000820 I 0.947
Ca_20148 Cicer arietinum Ca_20148 I 0.946
MTR_1g061600 Medicago truncatula MTR_1g061600 I 0.946
Solyc09g008850.2 Solanum lycopersicum Solyc09g008850.2 I 0.945
Gorai.007G371500 Gossypium raimondii Gorai.007G371500 I 0.944
Bra029812 Brassica rapa Bra029812 I 0.942
Bo5g137800 Brassica oleracea Bo5g137800 I 0.942
Carubv10015256m.g Capsella rubella Carubv10015256m.g I 0.939
Thhalv10020471m.g Eutrema salsugineum Thhalv10020471m.g I 0.939
Cagra.4686s0014 Capsella grandiflora Cagra.4686s0014 I 0.939
TCM_022397 Theobroma cacao TCM_022397 I 0.933
VIT_13s0074g00240 Vitis vinifera VIT_13s0074g00240 I 0.927
gene30101-v1.0-hybrid Fragaria vesca gene30101-v1.0-hybrid I 0.927
SapurV1A.0226s0070 Salix purpurea SapurV1A.0226s0070 I 0.927
POPTR_0006s11850 Populus trichocarpa POPTR_0006s11850 I 0.927
mgf008067m Mimulus guttatus mgf008067m I 0.915
GSMUA_Achr2G20220_001 Musa acuminata GSMUA_Achr2G20220_001 I 0.908
evm.TU.supercontig_128.55 Carica papaya evm.TU.supercontig_128.55 I 0.903
PRUPE_ppa022998mg Prunus persica PRUPE_ppa022998mg I 0.902
GLYMA10G34520 Glycine max GLYMA10G34520 I 0.901
MDP0000415733 Malus domestica MDP0000415733 I 0.895
MDP0000399495 Malus domestica MDP0000399495 I 0.895
MDP0000201016 Malus domestica MDP0000201016 I 0.895
Aquca_009_01006 Aquilegia coerulea Aquca_009_01006 I 0.885
GSMUA_Achr6G13420_001 Musa acuminata GSMUA_Achr6G13420_001 I 0.880
TCM_043551 Theobroma cacao TCM_043551 I 0.868
AMTR_s00006p00265300 Amborella trichopoda AMTR_s00006p00265300 I 0.866
28077.m000081 Ricinus communis 28077.m000081 I 0.862
SELMODRAFT_134056 Selaginella moellendorffii SELMODRAFT_134056 I 0.859
SELMODRAFT_130409 Selaginella moellendorffii SELMODRAFT_130409 I 0.859
POPTR_0008s02730 Populus trichocarpa POPTR_0008s02730 I 0.858
ONIVA04G09510 Oryza nivara ONIVA04G09510 I 0.855
BGIOSGA016339 Oryza indica BGIOSGA016339 I 0.855
OB04G18670 Oryza brachyantha OB04G18670 I 0.855
OMERI04G10080 Oryza meridionalis OMERI04G10080 I 0.855
OPUNC04G09570 Oryza punctata OPUNC04G09570 I 0.855
POPTR_0010s23970 Populus trichocarpa POPTR_0010s23970 I 0.853
SapurV1A.0243s0300 Salix purpurea SapurV1A.0243s0300 I 0.853
SapurV1A.0439s0120 Salix purpurea SapurV1A.0439s0120 I 0.853
LPERR04G08300 Leersia perrieri LPERR04G08300 I 0.852
MLOC_28975 Hordeum vulgare MLOC_28975 I 0.843
TRIUR3_22240 Triticum urartu TRIUR3_22240 I 0.830
Traes_2BL_83EDE2CBB Triticum aestivum Traes_2BL_83EDE2CBB I 0.830
OGLUM04G11230 Oryza glumaepatula OGLUM04G11230 I 0.830
Traes_2AL_246006E77 Triticum aestivum Traes_2AL_246006E77 I 0.830
F775_31501 Aegilops tauschii F775_31501 I 0.830
BRADI5G08980 Brachypodium distachyon BRADI5G08980 I 0.829
Pavir.J13370 Panicum virgatum Pavir.J13370 I 0.819
GRMZM2G002978 Zea mays GRMZM2G002978 I 0.815
Pavir.Gb01778 Panicum virgatum Pavir.Gb01778 I 0.815
Sb06g015280 Sorghum bicolor Sb06g015280 I 0.813
Si009787m.g Setaria italica Si009787m.g I 0.812