CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK27404.1_CONSTRUCT
(
PBM CONSTRUCTS
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
PK27404.1_CONSTRUCT
T250434_2.00
HughesLab (2013-Jun-13)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK27404.1_CONSTRUCT
M01261_2.00
PBM CONSTRUCTS
NNGGTAAAWN
NWTTTACCNN
PBM
Lambert et al.(2019)
pTH11345
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.812
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01261_2.00
MADF
51
121
QDMDAIFRDSSLKGPLWEEVSRKLAGLGFKRSAKKCKEKFENVYKYHKRTKEGRTGKTEGKTYRFFDQLAA
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK27404.1_CONSTRUCT
MADF
51
121
QDMDAIFRDSSLKGPLWEEVSRKLAGLGFKRSAKKCKEKFENVYKYHKRTKEGRTGKTEGKTYRFFDQLAA
Links
Other
MADF
family TFs
Other
PBM CONSTRUCTS
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK27404.1
Cannabis sativa
PK27404.1
I
0.966
LjSGA_010102.1
Lotus japonicus
LjSGA_010102.1
I
0.925
LjT17C10.90.nd
Lotus japonicus
LjT17C10.90.nd
I
0.867
Bo6g083660
Brassica oleracea
Bo6g083660
I
0.853