28077.m000081 (Ricinus communis)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 28077.m000081 T250435_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.895 0.639
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.895 0.639
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.895 0.639
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.859 0.597
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
28077.m000081 MADF 111 195

Links

Other MADF family TFs
Other Ricinus communis TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0243s0300 Salix purpurea SapurV1A.0243s0300 I 0.946
GLYMA10G34520 Glycine max GLYMA10G34520 I 0.946
SapurV1A.0439s0120 Salix purpurea SapurV1A.0439s0120 I 0.946
POPTR_0010s23970 Populus trichocarpa POPTR_0010s23970 I 0.946
POPTR_0008s02730 Populus trichocarpa POPTR_0008s02730 I 0.944
PRUPE_ppa022998mg Prunus persica PRUPE_ppa022998mg I 0.943
MDP0000201016 Malus domestica MDP0000201016 I 0.941
MDP0000399495 Malus domestica MDP0000399495 I 0.941
MDP0000415733 Malus domestica MDP0000415733 I 0.941
VIT_13s0074g00240 Vitis vinifera VIT_13s0074g00240 I 0.938
TCM_043551 Theobroma cacao TCM_043551 I 0.925
Aquca_019_00072 Aquilegia coerulea Aquca_019_00072 I 0.915
GLYMA20G33031 Glycine max GLYMA20G33031 I 0.914
GSMUA_Achr2G20220_001 Musa acuminata GSMUA_Achr2G20220_001 I 0.906
MLOC_28975 Hordeum vulgare MLOC_28975 I 0.904
evm.TU.supercontig_128.55 Carica papaya evm.TU.supercontig_128.55 I 0.903
VIT_08s0007g04160 Vitis vinifera VIT_08s0007g04160 I 0.899
Eucgr.A01571 Eucalyptus grandis Eucgr.A01571 I 0.899
Traes_2BL_83EDE2CBB Triticum aestivum Traes_2BL_83EDE2CBB I 0.896
F775_31501 Aegilops tauschii F775_31501 I 0.896
TRIUR3_22240 Triticum urartu TRIUR3_22240 I 0.896
Si009787m.g Setaria italica Si009787m.g I 0.896
GRMZM2G002978 Zea mays GRMZM2G002978 I 0.896
Traes_2AL_246006E77 Triticum aestivum Traes_2AL_246006E77 I 0.896
GSMUA_Achr6G13420_001 Musa acuminata GSMUA_Achr6G13420_001 I 0.896
Carubv10015256m.g Capsella rubella Carubv10015256m.g I 0.895
AT3G10030 Arabidopsis thaliana AT3G10030 D 0.895
Thhalv10020471m.g Eutrema salsugineum Thhalv10020471m.g I 0.895
fgenesh1_pm.C_scaffold_3000820 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000820 I 0.895
Bostr.22252s0062 Boechera stricta Bostr.22252s0062 I 0.895
Cagra.4686s0014 Capsella grandiflora Cagra.4686s0014 I 0.895
OMERI04G10080 Oryza meridionalis OMERI04G10080 I 0.894
Ca_20148 Cicer arietinum Ca_20148 I 0.892
MTR_1g061600 Medicago truncatula MTR_1g061600 I 0.892
Solyc09g008850.2 Solanum lycopersicum Solyc09g008850.2 I 0.891
GLYMA13G21371 Glycine max GLYMA13G21371 I 0.891
PGSC0003DMG400002727 Solanum tuberosum PGSC0003DMG400002727 I 0.891
Sb06g015280 Sorghum bicolor Sb06g015280 I 0.891
GLYMA10G07490 Glycine max GLYMA10G07490 I 0.891
mgf008067m Mimulus guttatus mgf008067m I 0.889
Pavir.J13370 Panicum virgatum Pavir.J13370 I 0.888
Aquca_009_01006 Aquilegia coerulea Aquca_009_01006 I 0.887
POPTR_0006s11850 Populus trichocarpa POPTR_0006s11850 I 0.886
SapurV1A.0226s0070 Salix purpurea SapurV1A.0226s0070 I 0.886
BGIOSGA016339 Oryza indica BGIOSGA016339 I 0.882
OGLUM04G11230 Oryza glumaepatula OGLUM04G11230 I 0.882
LPERR04G08300 Leersia perrieri LPERR04G08300 I 0.882
Pavir.Gb01778 Panicum virgatum Pavir.Gb01778 I 0.882
OPUNC04G09570 Oryza punctata OPUNC04G09570 I 0.882
OB04G18670 Oryza brachyantha OB04G18670 I 0.882
ONIVA04G09510 Oryza nivara ONIVA04G09510 I 0.882
29815.m000504 Ricinus communis 29815.m000504 I 0.881
BRADI5G08980 Brachypodium distachyon BRADI5G08980 I 0.881
cassava30771.valid.m1 Manihot esculenta cassava30771.valid.m1 I 0.881
Ciclev10011433m.g Citrus clementina Ciclev10011433m.g I 0.881
Bra029812 Brassica rapa Bra029812 I 0.876
Bo5g137800 Brassica oleracea Bo5g137800 I 0.876
AMTR_s00006p00265300 Amborella trichopoda AMTR_s00006p00265300 I 0.875
Gorai.007G371500 Gossypium raimondii Gorai.007G371500 I 0.874
Cla018015 Citrullus lanatus Cla018015 I 0.872
Cucsa.378670 Cucumis sativus Cucsa.378670 I 0.872
gene30101-v1.0-hybrid Fragaria vesca gene30101-v1.0-hybrid I 0.864
PRUPE_ppa004154mg Prunus persica PRUPE_ppa004154mg I 0.862
Pm026265 Prunus mume Pm026265 I 0.862
PK04914.1 Cannabis sativa PK04914.1 D 0.859
TCM_022397 Theobroma cacao TCM_022397 I 0.852
SELMODRAFT_134056 Selaginella moellendorffii SELMODRAFT_134056 I 0.813
SELMODRAFT_130409 Selaginella moellendorffii SELMODRAFT_130409 I 0.813