CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava34877.m1
(
Manihot esculenta
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
cassava34877.m1
T250473_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ASIL2
M06973_2.00
Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA
Dap-seq
OMalley et al.(2016)
At3g14180_col
0.893
0.803
ASIL1
M02264_2.00
Arabidopsis thaliana
NNDHCGDHNN
NNDHCGDHNN
PBM
Weirauch et al.(2014)
pTH7464
0.818
0.606
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava34877.m1
MADF
79
156
AWGERYLELSRGNLKQKHWKEVADIVSSREDYKKAAKTDIQCKNRIDTVKKKYKLEKAKIAAGGGPSKWPFFERLDQL
Links
Other
MADF
family TFs
Other
Manihot esculenta
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy