Cucsa.193210 (Cucumis sativus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Cucsa.193210 T250481_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.903 0.785
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.816 0.779
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.193210.1 MADF 112 182
Cucsa.193210.1 MADF 508 577
Cucsa.193210.2 MADF 1 46
Cucsa.193210.2 MADF 372 441
Cucsa.193210.3 MADF 1 46
Cucsa.193210.3 MADF 372 441

Links

Other MADF family TFs
Other Cucumis sativus TFs

Invalid Input OrderBy

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action