CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.195790
(
Cucumis sativus
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
Cucsa.195790
T250482_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.195790.1
MADF
22
101
HAWGQRHLDLNRGSLRHKHWQEIADAVNSSHGHDRKFFRTAIQCKNRIDTLKRKYKIEKVRIQESGGKYVCAWPFFSCLD
Links
Other
MADF
family TFs
Other
Cucumis sativus
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla002288
Citrullus lanatus
Cla002288
I
0.959
GSMUA_Achr9G06410_001
Musa acuminata
GSMUA_Achr9G06410_001
I
0.888
GSMUA_Achr1G27460_001
Musa acuminata
GSMUA_Achr1G27460_001
I
0.887
GSMUA_Achr5G09160_001
Musa acuminata
GSMUA_Achr5G09160_001
I
0.879
GSMUA_Achr1G11500_001
Musa acuminata
GSMUA_Achr1G11500_001
I
0.874
cassava21220.m1
Manihot esculenta
cassava21220.m1
I
0.866
cassava2218.valid.m1
Manihot esculenta
cassava2218.valid.m1
I
0.866
29900.m001628
Ricinus communis
29900.m001628
I
0.866
MTR_4g079960
Medicago truncatula
MTR_4g079960
I
0.865
LjSGA_058481.1
Lotus japonicus
LjSGA_058481.1
I
0.854
Ca_19877
Cicer arietinum
Ca_19877
I
0.854
VIT_12s0028g02150
Vitis vinifera
VIT_12s0028g02150
I
0.848
GSMUA_Achr6G26840_001
Musa acuminata
GSMUA_Achr6G26840_001
I
0.846
Ca_02494
Cicer arietinum
Ca_02494
N
0.844
Solyc12g010890.1
Solanum lycopersicum
Solyc12g010890.1
I
0.834
PGSC0003DMG400007806
Solanum tuberosum
PGSC0003DMG400007806
I
0.834
evm.TU.supercontig_7.72
Carica papaya
evm.TU.supercontig_7.72
I
0.833
evm.TU.supercontig_209.41
Carica papaya
evm.TU.supercontig_209.41
I
0.832
VIT_10s0003g01300
Vitis vinifera
VIT_10s0003g01300
I
0.827
PRUPE_ppa009171mg
Prunus persica
PRUPE_ppa009171mg
I
0.814