Cucsa.195790 (Cucumis sativus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Cucsa.195790 T250482_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.195790.1 MADF 22 101

Links

Other MADF family TFs
Other Cucumis sativus TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cla002288 Citrullus lanatus Cla002288 I 0.959
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.888
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.887
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.879
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.874
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.866
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.866
29900.m001628 Ricinus communis 29900.m001628 I 0.866
MTR_4g079960 Medicago truncatula MTR_4g079960 I 0.865
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.854
Ca_19877 Cicer arietinum Ca_19877 I 0.854
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.848
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.846
Ca_02494 Cicer arietinum Ca_02494 N 0.844
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I 0.834
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I 0.834
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.833
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I 0.832
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.827
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.814