Cucsa.256710 (Cucumis sativus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Cucsa.256710 T250487_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.256710.1 MADF 69 149

Links

Other MADF family TFs
Other Cucumis sativus TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla021714 Citrullus lanatus Cla021714 N 0.971
PK17306.1 Cannabis sativa PK17306.1 N 0.955
gene05318-v1.0-hybrid Fragaria vesca gene05318-v1.0-hybrid N 0.947
29709.m001180 Ricinus communis 29709.m001180 N 0.933
POPTR_0002s14030 Populus trichocarpa POPTR_0002s14030 N 0.930
MDP0000557282 Malus domestica MDP0000557282 N 0.927
Ciclev10020863m.g Citrus clementina Ciclev10020863m.g N 0.925
orange1.1g018620m.g Citrus sinensis orange1.1g018620m.g N 0.925
MTR_4g117990 Medicago truncatula MTR_4g117990 N 0.914
Bo3g037360 Brassica oleracea Bo3g037360 N 0.907
Cagra.0239s0022 Capsella grandiflora Cagra.0239s0022 N 0.907
Bra000360 Brassica rapa Bra000360 N 0.907
Carubv10025047m.g Capsella rubella Carubv10025047m.g N 0.907
GLYMA18G48343 Glycine max GLYMA18G48343 N 0.906
evm.TU.supercontig_41.83 Carica papaya evm.TU.supercontig_41.83 N 0.904
Ca_06067 Cicer arietinum Ca_06067 N 0.903
chr4.CM0739.40.nd Lotus japonicus chr4.CM0739.40.nd N 0.902
Ca_06795 Cicer arietinum Ca_06795 N 0.902
GLYMA08G05630 Glycine max GLYMA08G05630 N 0.902
SapurV1A.0033s0070 Salix purpurea SapurV1A.0033s0070 N 0.901
cassava12982.valid.m1 Manihot esculenta cassava12982.valid.m1 N 0.896
TCM_005773 Theobroma cacao TCM_005773 N 0.894
Gorai.004G167100 Gossypium raimondii Gorai.004G167100 N 0.894
POPTR_0014s05010 Populus trichocarpa POPTR_0014s05010 N 0.893
VIT_15s0021g01220 Vitis vinifera VIT_15s0021g01220 N 0.890
fgenesh2_kg.4__2662__AT2G44730.1 Arabidopsis lyrata fgenesh2_kg.4__2662__AT2G44730.1 N 0.877
AT2G44730 Arabidopsis thaliana AT2G44730 N 0.877
Bostr.25993s0300 Boechera stricta Bostr.25993s0300 N 0.877
Bo4g023990 Brassica oleracea Bo4g023990 N 0.877
Bra004859 Brassica rapa Bra004859 N 0.865
GLYMA09G38050 Glycine max GLYMA09G38050 N 0.863
MTR_7g081190 Medicago truncatula MTR_7g081190 N 0.856
mgf005560m Mimulus guttatus mgf005560m N 0.854
Aquca_010_00154 Aquilegia coerulea Aquca_010_00154 N 0.851
MDP0000158598 Malus domestica MDP0000158598 N 0.845
Traes_5BL_81FD6E89B Triticum aestivum Traes_5BL_81FD6E89B N 0.838
MLOC_51079 Hordeum vulgare MLOC_51079 N 0.838