Cucsa.358990 (Cucumis sativus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Cucsa.358990 T250488_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.358990.1 MADF 163 237

Links

Other MADF family TFs
Other Cucumis sativus TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla015679 Citrullus lanatus Cla015679 N 0.971
Pm013502 Prunus mume Pm013502 N 0.960
PRUPE_ppa009556mg Prunus persica PRUPE_ppa009556mg N 0.960
MDP0000276691 Malus domestica MDP0000276691 N 0.956
Eucgr.J02994 Eucalyptus grandis Eucgr.J02994 N 0.950
PK03816.1 Cannabis sativa PK03816.1 N 0.949
gene05956-v1.0-hybrid Fragaria vesca gene05956-v1.0-hybrid N 0.947
mgf024433m Mimulus guttatus mgf024433m N 0.938
evm.TU.supercontig_181.13 Carica papaya evm.TU.supercontig_181.13 N 0.935
MTR_2g102227 Medicago truncatula MTR_2g102227 N 0.933
Gorai.006G098600 Gossypium raimondii Gorai.006G098600 N 0.926
orange1.1g048259m.g Citrus sinensis orange1.1g048259m.g N 0.925
Gorai.010G228000 Gossypium raimondii Gorai.010G228000 N 0.925
Ciclev10025757m.g Citrus clementina Ciclev10025757m.g N 0.925
cassava1476.valid.m1 Manihot esculenta cassava1476.valid.m1 N 0.925
GLYMA15G01730 Glycine max GLYMA15G01730 N 0.918
VIT_09s0002g04700 Vitis vinifera VIT_09s0002g04700 N 0.914
TCM_028688 Theobroma cacao TCM_028688 N 0.907
PGSC0003DMG400031382 Solanum tuberosum PGSC0003DMG400031382 N 0.907
Pm027397 Prunus mume Pm027397 N 0.906
MDP0000500940 Malus domestica MDP0000500940 N 0.903
GLYMA13G43651 Glycine max GLYMA13G43651 N 0.898
Solyc12g043090.1 Solanum lycopersicum Solyc12g043090.1 N 0.898
29872.m000548 Ricinus communis 29872.m000548 N 0.898
POPTR_0001s18000 Populus trichocarpa POPTR_0001s18000 N 0.897
SapurV1A.3798s0010 Salix purpurea SapurV1A.3798s0010 N 0.895
SapurV1A.1168s0060 Salix purpurea SapurV1A.1168s0060 N 0.895
POPTR_0003s05470 Populus trichocarpa POPTR_0003s05470 N 0.889
Gorai.009G133300 Gossypium raimondii Gorai.009G133300 N 0.864
Lus10025772.g Linum usitatissimum Lus10025772.g N 0.863
SapurV1A.0002s0250 Salix purpurea SapurV1A.0002s0250 N 0.860
gene02091-v1.0-hybrid Fragaria vesca gene02091-v1.0-hybrid N 0.858
Aquca_001_00551 Aquilegia coerulea Aquca_001_00551 N 0.851
Lus10035893.g Linum usitatissimum Lus10035893.g N 0.848
PGSC0003DMG400027438 Solanum tuberosum PGSC0003DMG400027438 N 0.847
Solyc05g018350.2 Solanum lycopersicum Solyc05g018350.2 N 0.847
orange1.1g019823m.g Citrus sinensis orange1.1g019823m.g N 0.840
Ciclev10008866m.g Citrus clementina Ciclev10008866m.g N 0.840
Ca_12978 Cicer arietinum Ca_12978 N 0.839
Aquca_020_00179 Aquilegia coerulea Aquca_020_00179 N 0.826
Bo3g083280 Brassica oleracea Bo3g083280 N 0.815
Bra001951 Brassica rapa Bra001951 N 0.815
VIT_11s0016g04130 Vitis vinifera VIT_11s0016g04130 N 0.814
MTR_6g486270 Medicago truncatula MTR_6g486270 N 0.812