mgf016368m (Mimulus guttatus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 mgf016368m T250538_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20543.1
M01264_2.00 		Cannabis sativa
YTAACYNNNN
NNNNRGTTAR		 PBM
Lambert et al.(2019)
pTH11253 		0.903 0.690
MDP0000164819
M02280_2.00 		Malus domestica
YTAACYVNNN
NNNBRGTTAR		 PBM
Weirauch et al.(2014)
pTH9204 		0.898 0.676
cassava13991.valid.m1
M02279_2.00 		Manihot esculenta
NNDACHNNNN
NNNNDGTHNN		 PBM
Weirauch et al.(2014)
pTH9206 		0.898 0.662
OS04G0486400
M02273_2.00 		Oryza sativa
YTAACYNNNN
NNNNRGTTAR		 PBM
Weirauch et al.(2014)
pTH9338 		0.894 0.676
GT-1
M02263_2.00 		Arabidopsis thaliana
KTTAACCM
KGGTTAAM		 PBM
Weirauch et al.(2014)
pTH8149 		0.893 0.577
GT-1
M10896_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GT1_Q6_02 		0.893 0.577
GT-1
M10897_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GT1_Q6 		0.893 0.577
GLYMA11G37390
M02269_2.00 		Glycine max
BWDACYNNNN
NNNNRGTHWV		 PBM
Weirauch et al.(2014)
pTH9183 		0.892 0.521
MTR_3g085960
M02270_2.00 		Medicago truncatula
NWAACYNNNN
NNNNRGTTWN		 PBM
Weirauch et al.(2014)
pTH9208 		0.892 0.521
GT-1
M02274_2.00 		Arabidopsis lyrata
GGTTAACC
GGTTAACC		 PBM
Weirauch et al.(2014)
pTH9235 		0.891 0.549
29929.m004704
M02278_2.00 		Ricinus communis
NDNDHDHNHN
NDNDHDHNHN		 PBM
Weirauch et al.(2014)
pTH9339 		0.891 0.648
fgenesh2_kg.5__353__AT3G25990.1
M02268_2.00 		Arabidopsis lyrata
NNNHAACCCCYNN
NNRGGGGTTDNNN		 PBM
Weirauch et al.(2014)
pTH9228 		0.888 0.592
GT-4
M02265_2.00 		Arabidopsis thaliana
NHDACHNNNN
NNNNDGTHDN		 PBM
Weirauch et al.(2014)
pTH7910 		0.878 0.577
GT-4
M06974_2.00 		Arabidopsis thaliana
AACCATGGTTAADWYWWWWHH
DDWWWWRWHTTAACCATGGTT		 Dap-seq
OMalley et al.(2016)
AT3G25990_col_a 		0.878 0.577
GT-4
M06975_2.00 		Arabidopsis thaliana
WWMNYTAACYVWRRTTADNH
DNHTAAYYWBRGTTARNKWW		 Dap-seq
OMalley et al.(2016)
AT3G25990_colamp_a 		0.878 0.577
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf016368m MADF 89 170

Links

Other MADF family TFs
Other Mimulus guttatus TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc12g077540.1 Solanum lycopersicum Solyc12g077540.1 I 0.943
Eucgr.J02286 Eucalyptus grandis Eucgr.J02286 I 0.932
Pavir.Ga01561 Panicum virgatum Pavir.Ga01561 I 0.929
SapurV1A.0206s0170 Salix purpurea SapurV1A.0206s0170 I 0.913
Gorai.009G333800 Gossypium raimondii Gorai.009G333800 I 0.909
POPTR_0008s17980 Populus trichocarpa POPTR_0008s17980 I 0.909
VIT_14s0171g00450 Vitis vinifera VIT_14s0171g00450 I 0.909
TCM_010751 Theobroma cacao TCM_010751 I 0.909
AMTR_s00055p00209070 Amborella trichopoda AMTR_s00055p00209070 I 0.904
evm.TU.supercontig_130.35 Carica papaya evm.TU.supercontig_130.35 I 0.904
PK20543.1 Cannabis sativa PK20543.1 D 0.903
GSMUA_Achr3G19370_001 Musa acuminata GSMUA_Achr3G19370_001 I 0.903
PRUPE_ppa009404mg Prunus persica PRUPE_ppa009404mg I 0.902
Bostr.0556s0275 Boechera stricta Bostr.0556s0275 I 0.900
Bra026903 Brassica rapa Bra026903 I 0.900
Bo8g107400 Brassica oleracea Bo8g107400 I 0.900
cassava11841.valid.m1 Manihot esculenta cassava11841.valid.m1 I 0.898
Gorai.008G163200 Gossypium raimondii Gorai.008G163200 I 0.898
PDK_20s1345831g002 Phoenix dactylifera PDK_20s1345831g002 I 0.898
SapurV1A.1719s0020 Salix purpurea SapurV1A.1719s0020 I 0.898
MDP0000164819 Malus domestica MDP0000164819 D 0.898
Aquca_011_00297 Aquilegia coerulea Aquca_011_00297 I 0.898
cassava13991.valid.m1 Manihot esculenta cassava13991.valid.m1 D 0.898
Pm006885 Prunus mume Pm006885 I 0.898
POPTR_0010s06510 Populus trichocarpa POPTR_0010s06510 I 0.898
Lus10015824.g Linum usitatissimum Lus10015824.g I 0.895
OS04G0486400 Oryza sativa OS04G0486400 D 0.894
MLOC_64014 Hordeum vulgare MLOC_64014 I 0.894
GT-1 Arabidopsis thaliana AT1G13450 D 0.893
GLYMA11G37390 Glycine max GLYMA11G37390 D 0.892
GRMZM2G047370 Zea mays GRMZM2G047370 I 0.892
MTR_3g085960 Medicago truncatula MTR_3g085960 D 0.892
Cucsa.394820 Cucumis sativus Cucsa.394820 I 0.892
Cla023054 Citrullus lanatus Cla023054 I 0.892
LjT04G17.70.nc Lotus japonicus LjT04G17.70.nc I 0.892
Si010147m.g Setaria italica Si010147m.g I 0.892
GT-1 Arabidopsis lyrata scaffold_101505.1 D 0.891
Thhalv10007959m.g Eutrema salsugineum Thhalv10007959m.g I 0.891
evm.TU.supercontig_1453.1 Carica papaya evm.TU.supercontig_1453.1 I 0.891
Lus10036978.g Linum usitatissimum Lus10036978.g I 0.891
Cagra.3501s0157 Capsella grandiflora Cagra.3501s0157 I 0.891
Carubv10009313m.g Capsella rubella Carubv10009313m.g I 0.891
29929.m004704 Ricinus communis 29929.m004704 D 0.891
Si036121m.g Setaria italica Si036121m.g I 0.891
Ca_11315 Cicer arietinum Ca_11315 I 0.890
GLYMA18G01360 Glycine max GLYMA18G01360 I 0.890
Bra019721 Brassica rapa Bra019721 I 0.890
Carubv10017413m.g Capsella rubella Carubv10017413m.g I 0.890
Cagra.6197s0012 Capsella grandiflora Cagra.6197s0012 I 0.890
VIT_01s0010g02420 Vitis vinifera VIT_01s0010g02420 I 0.890
Bo5g017510 Brassica oleracea Bo5g017510 I 0.890
fgenesh2_kg.5__353__AT3G25990.1 Arabidopsis lyrata fgenesh2_kg.5__353__AT3G25990.1 D 0.888
Eucgr.B03456 Eucalyptus grandis Eucgr.B03456 I 0.888
Ciclev10031750m.g Citrus clementina Ciclev10031750m.g I 0.885
orange1.1g015940m.g Citrus sinensis orange1.1g015940m.g I 0.885
Bostr.13671s0104 Boechera stricta Bostr.13671s0104 I 0.884
Thhalv10004359m.g Eutrema salsugineum Thhalv10004359m.g I 0.881
Aquca_123_00031 Aquilegia coerulea Aquca_123_00031 I 0.880
PRUPE_ppa005942mg Prunus persica PRUPE_ppa005942mg I 0.880
Pm016214 Prunus mume Pm016214 I 0.880
OB04G23970 Oryza brachyantha OB04G23970 I 0.878
GT-4 Arabidopsis thaliana AT3G25990 D 0.878
MDP0000275412 Malus domestica MDP0000275412 I 0.875
Bo2g138840 Brassica oleracea Bo2g138840 I 0.872
Bra036354 Brassica rapa Bra036354 I 0.872
AMTR_s00005p00185670 Amborella trichopoda AMTR_s00005p00185670 I 0.866
GSMUA_Achr5G17240_001 Musa acuminata GSMUA_Achr5G17240_001 I 0.864