Aquca_019_00072 (Aquilegia coerulea)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Aquca_019_00072 T250570_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK04914.1
M01262_2.00
Cannabis sativa
DCCGTYAN

NTRACGGH
PBM
Lambert et al.(2019)
pTH10098
0.938 0.747
AT3G10030
M01258_2.00
Arabidopsis thaliana
NRMCGTTAWNN

NNWTAACGKYN
PBM
Lambert et al.(2019)
pTH11538
0.937 0.733
AT3G10030
M06971_2.00
Arabidopsis thaliana
HRHCKCCGTTANND

HNNTAACGGMGDYD
Dap-seq
OMalley et al.(2016)
AT3G10030_col_a
0.937 0.733
AT3G10030
M06972_2.00
Arabidopsis thaliana
HWRHMKCCGTTAAHD

HDTTAACGGMKDYWD
Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a
0.937 0.743
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_019_00072.1 MADF 193 276
Aquca_019_00072.2 MADF 193 276
Aquca_019_00072.3 MADF 192 276
Aquca_019_00072.4 MADF 192 276
Aquca_019_00072.5 MADF 192 276

Links

Other MADF family TFs
Other Aquilegia coerulea TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Al_scaffold_0007_3741 Arabidopsis lyrata Al_scaffold_0007_3741 I 0.000
Bostr.10058s0014 Boechera stricta Bostr.10058s0014 I 0.000
scaffold_704060.1 Arabidopsis lyrata scaffold_704060.1 I 0.000
AGL75 Arabidopsis thaliana AT5G41200 I 0.000
AGL76 Arabidopsis thaliana AT5G40120 I 0.000
AGL98 Arabidopsis thaliana AT5G39810 I 0.000
AGL81 Arabidopsis thaliana AT5G39750 I 0.000
AGL77 Arabidopsis thaliana AT5G38740 I 0.000
AGL105 Arabidopsis thaliana AT5G37415 I 0.000
Thhalv10005435m.g Eutrema salsugineum Thhalv10005435m.g N 0.000
Thhalv10002808m.g Eutrema salsugineum Thhalv10002808m.g N 0.000
Carubv10003716m.g Capsella rubella Carubv10003716m.g N 0.000
Carubv10003642m.g Capsella rubella Carubv10003642m.g N 0.000
Cagra.29077s0001 Capsella grandiflora Cagra.29077s0001 N 0.000
Bostr.29827s0112 Boechera stricta Bostr.29827s0112 N 0.000
AT5G26865 Arabidopsis thaliana AT5G26865 N 0.000
AGL93 Arabidopsis thaliana AT5G26950 N 0.000
fgenesh2_kg.6__2751__AT5G27070.1 Arabidopsis lyrata fgenesh2_kg.6__2751__AT5G27070.1 N 0.000
fgenesh2_kg.6__2748__AT5G27944.1 Arabidopsis lyrata fgenesh2_kg.6__2748__AT5G27944.1 N 0.000
AGL53 Arabidopsis thaliana AT5G27070 N 0.000
AGL54 Arabidopsis thaliana AT5G27090 N 0.000
AGL89 Arabidopsis thaliana AT5G27580 N 0.000
AT5G27944 Arabidopsis thaliana AT5G27944 N 0.000
Thhalv10005452m.g Eutrema salsugineum Thhalv10005452m.g N 0.000