CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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Aquca_020_00550
(
Aquilegia coerulea
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
Aquca_020_00550
T250572_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ASIL2
M06973_2.00
Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA
Dap-seq
OMalley et al.(2016)
At3g14180_col
0.860
0.746
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_020_00550.1
MADF
86
163
AWGERYLELSRGNLKQKHWRDVADIVSSREDYNKPAKTDVQCKNRIDTLKKKYKIEVAKIASGQGPSKWNFFHRLDRL
Links
Other
MADF
family TFs
Other
Aquilegia coerulea
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy