Aquca_037_00343 (Aquilegia coerulea)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Aquca_037_00343 T250575_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.915 0.824
PK15172.1
M01263_2.00 		Cannabis sativa
NNNGTWAHWN
NWDTWACNNN		 PBM
Lambert et al.(2019)
pTH10125 		0.946 0.866
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.915 0.824
OS02G0104500
M02271_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH8719 		0.887 0.731
OS02G0104500
M02272_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH9273 		0.887 0.731
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_037_00343.1 MADF 120 191
Aquca_037_00343.1 MADF 543 612
Aquca_037_00343.2 MADF 135 206
Aquca_037_00343.2 MADF 558 627
Aquca_037_00343.3 MADF 336 405
Aquca_037_00343.4 MADF 336 405
Aquca_037_00343.5 MADF 336 405

Links

Other MADF family TFs
Other Aquilegia coerulea TFs

Invalid Input OrderBy

263 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action