Bostr.14419s0059 (Boechera stricta)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Bostr.14419s0059 T250584_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G47660
M02266_2.00 		Arabidopsis thaliana
RCGGTAAW
WTTACCGY		 PBM
Weirauch et al.(2014)
pTH7911 		0.963 0.914
AT5G47660
M06980_2.00 		Arabidopsis thaliana
RCRGTWAAAAHDDHW
WDHHDTTTTWACYGY		 Dap-seq
OMalley et al.(2016)
AT5G47660_col_a 		0.963 0.914
AT5G47660
M06981_2.00 		Arabidopsis thaliana
WHHHHRCRGTWAAWW
WWTTWACYGYDDDDW		 Dap-seq
OMalley et al.(2016)
AT5G47660_colamp_a 		0.963 0.914
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.14419s0059.1.p MADF 314 386

Links

Other MADF family TFs
Other Boechera stricta TFs

Invalid Input OrderBy

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action