Bostr.20903s0103 (Boechera stricta)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Bostr.20903s0103 T250590_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G58630
M06976_2.00
Arabidopsis thaliana
HNTCGCCGGARWHDN

NHDWYTCCGGCGAND
Dap-seq
OMalley et al.(2016)
AT3G58630_col_a
0.969 0.945
AT3G58630
M06977_2.00
Arabidopsis thaliana
NNTCGCCGGARWHDN

NHDWYTCCGGCGANN
Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a
0.969 0.945
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.20903s0103.1.p MADF 38 127

Links

Other MADF family TFs
Other Boechera stricta TFs

Invalid Input OrderBy

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action