Cagra.0562s0030 (Capsella grandiflora)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Cagra.0562s0030 T250602_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0562s0030.1.p MADF 47 123

Links

Other MADF family TFs
Other Capsella grandiflora TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Carubv10019255m.g Capsella rubella Carubv10019255m.g N 0.971
Bostr.0697s0050 Boechera stricta Bostr.0697s0050 N 0.970
fgenesh2_kg.5__1832__AT3G54390.1 Arabidopsis lyrata fgenesh2_kg.5__1832__AT3G54390.1 N 0.970
Bra007069 Brassica rapa Bra007069 N 0.968
SapurV1A.0574s0200 Salix purpurea SapurV1A.0574s0200 N 0.964
PRUPE_ppa007968mg Prunus persica PRUPE_ppa007968mg N 0.964
POPTR_0001s06580 Populus trichocarpa POPTR_0001s06580 N 0.964
AT3G54390 Arabidopsis thaliana AT3G54390 N 0.962
cassava22232.valid.m1 Manihot esculenta cassava22232.valid.m1 N 0.960
Bo8g083630 Brassica oleracea Bo8g083630 N 0.958
GLYMA13G26550 Glycine max GLYMA13G26550 N 0.955
Bo8g068640 Brassica oleracea Bo8g068640 N 0.953
Pm016744 Prunus mume Pm016744 N 0.952
SapurV1A.0009s1160 Salix purpurea SapurV1A.0009s1160 N 0.951
VIT_13s0084g00800 Vitis vinifera VIT_13s0084g00800 N 0.951
POPTR_0003s19470 Populus trichocarpa POPTR_0003s19470 N 0.951
Cla010096 Citrullus lanatus Cla010096 N 0.944
Solyc01g096470.2 Solanum lycopersicum Solyc01g096470.2 N 0.942
LjSGA_030847.2 Lotus japonicus LjSGA_030847.2 N 0.941
MDP0000727700 Malus domestica MDP0000727700 N 0.938
MDP0000123719 Malus domestica MDP0000123719 N 0.938
GLYMA11G25570 Glycine max GLYMA11G25570 N 0.935
Aquca_004_00804 Aquilegia coerulea Aquca_004_00804 N 0.918
Ciclev10001759m.g Citrus clementina Ciclev10001759m.g N 0.912
GLYMA15G37451 Glycine max GLYMA15G37451 N 0.909