Cagra.3631s0005 (Capsella grandiflora)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Cagra.3631s0005 T250613_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ASIL2
M06973_2.00
Arabidopsis thaliana
TCRCCGGARAH

DTYTCCGGYGA
Dap-seq
OMalley et al.(2016)
At3g14180_col
0.971 0.986
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.3631s0005.1.p MADF 99 176

Links

Other MADF family TFs
Other Capsella grandiflora TFs

Invalid Input OrderBy

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action