Carubv10001830m.g (Capsella rubella)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Carubv10001830m.g T250618_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT5G05550
M06978_2.00
Arabidopsis thaliana
HNDYCGCCGGMRWND

HNWYKCCGGCGRHND
Dap-seq
OMalley et al.(2016)
AT5G05550_col_a
0.875 0.806
AT5G05550
M06979_2.00
Arabidopsis thaliana
HYNYCGCCGGARWHD

HDWYTCCGGCGRNRD
Dap-seq
OMalley et al.(2016)
AT5G05550_colamp_a
0.875 0.806
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10001830m MADF 33 107

Links

Other MADF family TFs
Other Capsella rubella TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI56791 Acyrthosiphon pisum ACYPI56791 I 0.000
ACYPI48166 Acyrthosiphon pisum ACYPI48166 I 0.000
ACYPI066036 Acyrthosiphon pisum ACYPI066036 I 0.000
AAEL011231 Aedes aegypti AAEL011231 I 0.000
AALB007603 Anopheles albimanus AALB007603 I 0.000
AARA005929 Anopheles arabiensis AARA005929 I 0.000
AATE013762 Anopheles atroparvus AATE013762 I 0.000
ACUA011505 Anopheles culicifacies ACUA011505 I 0.000
ADIR005732 Anopheles dirus ADIR005732 I 0.000
AEPI004043 Anopheles epiroticus AEPI004043 I 0.000
AFAF014433 Anopheles farauti AFAF014433 I 0.000
AFUN003486 Anopheles funestus AFUN003486 I 0.000
AGAP028221 Anopheles gambiae AGAP028221 I 0.000
AGAP010438 Anopheles gambiae AGAP010438 D 0.000
AMEM014965 Anopheles merus AMEM014965 I 0.000
AMIN004996 Anopheles minimus AMIN004996 I 0.000
AQUA005997 Anopheles quadriannulatus AQUA005997 I 0.000
ASIS019127 Anopheles sinensis ASIS019127 I 0.000
GB48727 Apis mellifera GB48727 I 0.000
GB52331 Apis mellifera GB52331 I 0.000
GB51231 Apis mellifera GB51231 I 0.000
ACEP12797 Atta cephalotes ACEP12797 I 0.000
ACEP13260 Atta cephalotes ACEP13260 I 0.000
Cflo_03603--XP_001120531.1_APIME Camponotus floridanus Cflo_03603--XP_001120531.1_APIME I 0.000
Cflo_03607--XP_395932.2_APIME Camponotus floridanus Cflo_03607--XP_395932.2_APIME I 0.000
CLEC025065 Cimex lectularius CLEC025065 I 0.000
CLEC007515 Cimex lectularius CLEC007515 I 0.000
csin104466 Clonorchis sinensis csin104466 I 0.000
KGM_21348 Danaus plexippus KGM_21348 I 0.000
KGM_10290 Danaus plexippus KGM_10290 I 0.000
DAPPUDRAFT_290668 Daphnia pulex DAPPUDRAFT_290668 I 0.000
DAPPUDRAFT_290673 Daphnia pulex DAPPUDRAFT_290673 I 0.000
DILT_0000083601 Diphyllobothrium latum DILT_0000083601 N 0.000
GF24122 Drosophila ananassae FBgn0101116 I 0.000
GF25170 Drosophila ananassae FBgn0102162 I 0.000
GF24121 Drosophila ananassae FBgn0101115 I 0.000
GG16225 Drosophila erecta FBgn0108460 I 0.000
GG13292 Drosophila erecta FBgn0105564 I 0.000
GG13294 Drosophila erecta FBgn0105566 I 0.000
GH16982 Drosophila grimshawi FBgn0124453 I 0.000
GH16981 Drosophila grimshawi FBgn0124452 I 0.000
GH16373 Drosophila grimshawi FBgn0123844 I 0.000
kni Drosophila melanogaster FBgn0001320 D 0.000
eg Drosophila melanogaster FBgn0000560 D 0.000
knrl Drosophila melanogaster FBgn0001323 D 0.000
GI11900 Drosophila mojavensis FBgn0134658 I 0.000
GI11896 Drosophila mojavensis FBgn0134654 I 0.000
GI11566 Drosophila mojavensis FBgn0134326 I 0.000
GL12762 Drosophila persimilis FBgn0150368 I 0.000
GL12764 Drosophila persimilis FBgn0150370 I 0.000
GL24862 Drosophila persimilis FBgn0162450 I 0.000
GA20312 Drosophila pseudoobscura FBgn0080307 I 0.000
GA18381 Drosophila pseudoobscura FBgn0078384 I 0.000
GA18413 Drosophila pseudoobscura FBgn0078415 I 0.000
kni Drosophila sechellia FBgn0044208 I 0.000
GM22199 Drosophila sechellia FBgn0177069 I 0.000
GD12173 Drosophila simulans FBgn0183909 I 0.000
kni Drosophila simulans FBgn0044187 I 0.000
GD15001 Drosophila simulans FBgn0186673 I 0.000
GJ13774 Drosophila virilis FBgn0200993 I 0.000
kni Drosophila virilis FBgn0013118 I 0.000
GJ11245 Drosophila virilis FBgn0198506 I 0.000
GK10566 Drosophila willistoni FBgn0212581 I 0.000
GK17344 Drosophila willistoni FBgn0219343 I 0.000
GK10545 Drosophila willistoni FBgn0212560 I 0.000
GE23274 Drosophila yakuba FBgn0240471 I 0.000
GE19793 Drosophila yakuba FBgn0237126 I 0.000
GE22389 Drosophila yakuba FBgn0239612 I 0.000
GE22392 Drosophila yakuba FBgn0239615 I 0.000
HHAL001315-PA Halyomorpha halys HHAL001315-PA I 0.000
Hsal_02936--XP_001120531.1_APIME Harpegnathos saltator Hsal_02936--XP_001120531.1_APIME I 0.000
Hsal_02933--XP_001120662.1_APIME Harpegnathos saltator Hsal_02933--XP_001120662.1_APIME I 0.000
Hsal_02927--XP_395932.2_APIME Harpegnathos saltator Hsal_02927--XP_395932.2_APIME I 0.000
HMEL010451 Heliconius melpomene HMEL010451 I 0.000
HDID_0000406601 Hymenolepis diminuta HDID_0000406601 I 0.000
HNAJ_0001369901 Hymenolepis nana HNAJ_0001369901 I 0.000
LDEC003050 Leptinotarsa decemlineata LDEC003050 I 0.000
LCUP004920 Lucilia cuprina LCUP004920 I 0.000
LCUP004919 Lucilia cuprina LCUP004919 I 0.000
LCUP004922 Lucilia cuprina LCUP004922 I 0.000
MDOA002495 Musca domestica MDOA002495 I 0.000
MDOA008593 Musca domestica MDOA008593 I 0.000
MDOA012160 Musca domestica MDOA012160 I 0.000
NV16468 Nasonia vitripennis NV16468 I 0.000
T265_13094 Opisthorchis viverrini T265_13094 I 0.000
PHUM468660 Pediculus humanus PHUM468660 I 0.000
PHUM470190 Pediculus humanus PHUM470190 I 0.000
PPAI002202 Phlebotomus papatasi PPAI002202 I 0.000
RPRC003216 Rhodnius prolixus RPRC003216 I 0.000
nRc.2.0.1.g43935 Romanomermis culicivorax nRc.2.0.1.g43935 I 0.000
SSLN_0000865601 Schistocephalus solidus SSLN_0000865601 N 0.000
SCUD_0002167301 Schistosoma curassoni SCUD_0002167301 N 0.000
A_05482 Schistosoma haematobium A_05482 I 0.000
SMTD_0001266401 Schistosoma mattheei SMTD_0001266401 I 0.000
SINV19531 Solenopsis invicta SINV19531 I 0.000
SINV19432 Solenopsis invicta SINV19432 I 0.000
SPER_0001282801 Spirometra erinaceieuropaei SPER_0001282801 N 0.000
SVE_0532500 Strongyloides venezuelensis SVE_0532500 I 0.000
tetur34g00430 Tetranychus urticae tetur34g00430 I 0.000
TC003413 Tribolium castaneum TC003413 I 0.000
TC003409 Tribolium castaneum TC003409 I 0.000
TRE_0000379501 Trichobilharzia regenti TRE_0000379501 I 0.000
L798_11128 Zootermopsis nevadensis L798_11128 I 0.000