Carubv10015798m.g (Capsella rubella)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Carubv10015798m.g T250628_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ASIL1
M02264_2.00
Arabidopsis thaliana
NNDHCGDHNN

NNDHCGDHNN
PBM
Weirauch et al.(2014)
pTH7464
0.843 0.562
ASIL2
M06973_2.00
Arabidopsis thaliana
TCRCCGGARAH

DTYTCCGGYGA
Dap-seq
OMalley et al.(2016)
At3g14180_col
0.829 0.630
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10015798m MADF 39 117

Links

Other MADF family TFs
Other Capsella rubella TFs

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52 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action