Carubv10019974m.g (Capsella rubella)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Carubv10019974m.g T250632_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT-GTL1
M06968_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_col_a
0.869 0.672
AT-GTL1
M06969_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_colamp_a
0.869 0.672
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10019974m MADF 102 172
Carubv10019974m MADF 456 528

Links

Other MADF family TFs
Other Capsella rubella TFs

Invalid Input OrderBy

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action