Eucgr.D02541 (Eucalyptus grandis)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Eucgr.D02541 T250660_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK15172.1
M01263_2.00
Cannabis sativa
NNNGTWAHWN

NWDTWACNNN
PBM
Lambert et al.(2019)
pTH10125
0.959 0.910
OS02G0104500
M02271_2.00
Oryza sativa
NDGTAAWWHN

NDWWTTACHN
PBM
Weirauch et al.(2014)
pTH8719
0.904 0.776
OS02G0104500
M02272_2.00
Oryza sativa
NDGTAAWWHN

NDWWTTACHN
PBM
Weirauch et al.(2014)
pTH9273
0.904 0.776
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.D02541.1 MADF 265 334

Links

Other MADF family TFs
Other Eucalyptus grandis TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MDP0000122269 Malus domestica MDP0000122269 I 0.961
Traes_1DL_772D1D7DF Triticum aestivum Traes_1DL_772D1D7DF I 0.961
PK15172.1 Cannabis sativa PK15172.1 D 0.959
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.957
Pavir.Ga00673 Panicum virgatum Pavir.Ga00673 I 0.956
TRIUR3_29570 Triticum urartu TRIUR3_29570 I 0.955
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.955
BGIOSGA011584 Oryza indica BGIOSGA011584 I 0.954
evm.TU.supercontig_21.195 Carica papaya evm.TU.supercontig_21.195 I 0.954
ORGLA04G0173400 Oryza glaberrima ORGLA04G0173400 I 0.953
PK14727.1 Cannabis sativa PK14727.1 I 0.953
MLOC_14207 Hordeum vulgare MLOC_14207 I 0.952
Traes_1AL_ED83D13D4 Triticum aestivum Traes_1AL_ED83D13D4 I 0.952
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.950
Bo6g083670 Brassica oleracea Bo6g083670 I 0.941
Lus10028584.g Linum usitatissimum Lus10028584.g I 0.937
LjSGA_034643.2 Lotus japonicus LjSGA_034643.2 I 0.935
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.934
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.933
Pavir.J25029 Panicum virgatum Pavir.J25029 I 0.926
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.925
Pavir.Ib03751 Panicum virgatum Pavir.Ib03751 I 0.924
VIT_04s0008g01850 Vitis vinifera VIT_04s0008g01850 I 0.923
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.922
Traes_4DL_DC6A55EEE Triticum aestivum Traes_4DL_DC6A55EEE I 0.922
Aquca_023_00132 Aquilegia coerulea Aquca_023_00132 I 0.915
Pavir.Aa03569 Panicum virgatum Pavir.Aa03569 I 0.914
Pavir.Ab00054 Panicum virgatum Pavir.Ab00054 I 0.914
GRMZM2G037128 Zea mays GRMZM2G037128 I 0.914
GSMUA_Achr7G04610_001 Musa acuminata GSMUA_Achr7G04610_001 I 0.914
Ciclev10010595m.g Citrus clementina Ciclev10010595m.g I 0.914
Sb04g000520 Sorghum bicolor Sb04g000520 I 0.914
orange1.1g009174m.g Citrus sinensis orange1.1g009174m.g I 0.914
OB02G10400 Oryza brachyantha OB02G10400 I 0.908
BGIOSGA007300 Oryza indica BGIOSGA007300 I 0.904
OPUNC02G00050 Oryza punctata OPUNC02G00050 I 0.904
ONIVA02G00390 Oryza nivara ONIVA02G00390 I 0.904
OGLUM02G00360 Oryza glumaepatula OGLUM02G00360 I 0.904
OBART02G00380 Oryza barthii OBART02G00380 I 0.904
GRMZM2G111760 Zea mays GRMZM2G111760 I 0.904
ORGLA02G0003500 Oryza glaberrima ORGLA02G0003500 I 0.904
OMERI02G09240 Oryza meridionalis OMERI02G09240 I 0.904
ORUFI02G00410 Oryza rufipogon ORUFI02G00410 I 0.904
OS02G0104500 Oryza sativa OS02G0104500 D 0.904
POPTR_0018s05520 Populus trichocarpa POPTR_0018s05520 I 0.902
SapurV1A.0435s0090 Salix purpurea SapurV1A.0435s0090 I 0.902
POPTR_0310s00200 Populus trichocarpa POPTR_0310s00200 I 0.902
POPTR_0018s05540 Populus trichocarpa POPTR_0018s05540 I 0.901
cassava25125.valid.m1 Manihot esculenta cassava25125.valid.m1 I 0.898
LPERR02G00380 Leersia perrieri LPERR02G00380 I 0.897
SapurV1A.0710s0040 Salix purpurea SapurV1A.0710s0040 I 0.895
POPTR_0006s23800 Populus trichocarpa POPTR_0006s23800 I 0.895
29739.m003611 Ricinus communis 29739.m003611 I 0.894
gene15385-v1.0-hybrid Fragaria vesca gene15385-v1.0-hybrid I 0.890
Si033157m.g Setaria italica Si033157m.g I 0.888
SELMODRAFT_14382 Selaginella moellendorffii SELMODRAFT_14382 I 0.886
SELMODRAFT_24518 Selaginella moellendorffii SELMODRAFT_24518 I 0.886
GSMUA_AchrUn_randomG03020_001 Musa acuminata GSMUA_AchrUn_randomG03020_001 I 0.885
Traes_6AS_52AE4A6E2 Triticum aestivum Traes_6AS_52AE4A6E2 I 0.881
TRIUR3_30093 Triticum urartu TRIUR3_30093 I 0.881
BRADI3G00697 Brachypodium distachyon BRADI3G00697 I 0.881
LjSGA_134698.1 Lotus japonicus LjSGA_134698.1 I 0.879
GSMUA_Achr1G24120_001 Musa acuminata GSMUA_Achr1G24120_001 I 0.871
MLOC_25460 Hordeum vulgare MLOC_25460 I 0.858
evm.TU.supercontig_126.31 Carica papaya evm.TU.supercontig_126.31 I 0.851
Bo2g152980 Brassica oleracea Bo2g152980 I 0.846
Gorai.010G096900 Gossypium raimondii Gorai.010G096900 I 0.846
30128.m008610 Ricinus communis 30128.m008610 I 0.841
Bo2g133550 Brassica oleracea Bo2g133550 I 0.836
Bo7g093250 Brassica oleracea Bo7g093250 I 0.832
TCM_037381 Theobroma cacao TCM_037381 I 0.832
Bostr.29827s0012 Boechera stricta Bostr.29827s0012 I 0.832
GLYMA15G12591 Glycine max GLYMA15G12591 N 0.826
Bra022149 Brassica rapa Bra022149 I 0.821
PK17889.1 Cannabis sativa PK17889.1 N 0.816
GLYMA09G01670 Glycine max GLYMA09G01670 N 0.815
Ca_07908 Cicer arietinum Ca_07908 N 0.812