evm.TU.supercontig_7.72 (Carica papaya)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 evm.TU.supercontig_7.72 T250679_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G58630
M06976_2.00
Arabidopsis thaliana
HNTCGCCGGARWHDN

NHDWYTCCGGCGAND
Dap-seq
OMalley et al.(2016)
AT3G58630_col_a
0.918 0.662
AT3G58630
M06977_2.00
Arabidopsis thaliana
NNTCGCCGGARWHDN

NHDWYTCCGGCGANN
Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a
0.918 0.662
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_7.72 MADF 46 128

Links

Other MADF family TFs
Other Carica papaya TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000013874 Ailuropoda melanoleuca ENSAMEG00000013874 N 0.000
ZBED9 Canis familiaris ENSCAFG00000011719 N 0.000
ZBED9 Callithrix jacchus ENSCJAG00000018566 N 0.000
ZBED9 Dasypus novemcinctus ENSDNOG00000004281 N 0.000
ZBED9 Equus caballus ENSECAG00000018074 N 0.000
ZBED9 Homo sapiens ENSG00000232040 N 0.000
ENSMICG00000014561 Microcebus murinus ENSMICG00000014561 N 0.000
ZBED9 Macaca mulatta ENSMMUG00000004619 N 0.000
ENSMPUG00000001260 Mustela putorius furo ENSMPUG00000001260 N 0.000
ENSNLEG00000004588 Nomascus leucogenys ENSNLEG00000004588 N 0.000
ZBED9 Otolemur garnettii ENSOGAG00000006616 N 0.000
ENSP00000395259 Macaca fascicularis ENSP00000395259 N 0.000
ENSP00000395259-D1 Bos grunniens ENSP00000395259-D1 N 0.000
ZBED9 Pan troglodytes ENSPTRG00000017880 N 0.000
ZBED9 Pteropus vampyrus ENSPVAG00000001156 N 0.000
ENSSTOG00000021874 Ictidomys tridecemlineatus ENSSTOG00000021874 N 0.000
ENSTSYG00000000644 Tarsius syrichta ENSTSYG00000000644 N 0.000
ZBED9 Tursiops truncatus ENSTTRG00000015657 N 0.000