CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene02091-v1.0-hybrid
(
Fragaria vesca
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
gene02091-v1.0-hybrid
T250681_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna02091.1-v1.0-hybrid
MADF
138
212
VWGDRFLQLGRKSLRSEDWGDVAAKVSEGCKMERSEKQCRRMLDMLKRKYKKEKAKMEEGGGSSNWGYYKKMEML
Links
Other
MADF
family TFs
Other
Fragaria vesca
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm027397
Prunus mume
Pm027397
N
0.912
Bra001951
Brassica rapa
Bra001951
N
0.868
Bo3g083280
Brassica oleracea
Bo3g083280
N
0.868
TCM_037914
Theobroma cacao
TCM_037914
N
0.865
Pm013502
Prunus mume
Pm013502
N
0.861
PRUPE_ppa009556mg
Prunus persica
PRUPE_ppa009556mg
N
0.861
orange1.1g019823m.g
Citrus sinensis
orange1.1g019823m.g
N
0.858
Cucsa.358990
Cucumis sativus
Cucsa.358990
N
0.858
Cla015679
Citrullus lanatus
Cla015679
N
0.858
Ciclev10008866m.g
Citrus clementina
Ciclev10008866m.g
N
0.858
MDP0000276691
Malus domestica
MDP0000276691
N
0.856
MDP0000260359
Malus domestica
MDP0000260359
N
0.850
MDP0000578820
Malus domestica
MDP0000578820
N
0.850
MTR_6g486270
Medicago truncatula
MTR_6g486270
N
0.845
mgf024433m
Mimulus guttatus
mgf024433m
N
0.845
AT3G24490
Arabidopsis thaliana
AT3G24490
N
0.842
scaffold_302996.1
Arabidopsis lyrata
scaffold_302996.1
N
0.842
Bostr.19424s0179
Boechera stricta
Bostr.19424s0179
N
0.842
Thhalv10002883m.g
Eutrema salsugineum
Thhalv10002883m.g
N
0.832
MTR_2g102227
Medicago truncatula
MTR_2g102227
N
0.824
gene05956-v1.0-hybrid
Fragaria vesca
gene05956-v1.0-hybrid
N
0.822
Ca_12978
Cicer arietinum
Ca_12978
N
0.820
Eucgr.J02994
Eucalyptus grandis
Eucgr.J02994
N
0.813