gene18585-v1.0-hybrid (Fragaria vesca)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 gene18585-v1.0-hybrid T250692_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna18585.1-v1.0-hybrid MADF 68 138
mrna18585.1-v1.0-hybrid MADF 399 473

Links

Other MADF family TFs
Other Fragaria vesca TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.907
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.907
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.906
TCM_001348 Theobroma cacao TCM_001348 I 0.905
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.903
30206.m000769 Ricinus communis 30206.m000769 I 0.900
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.898
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.897
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.896
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.895
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.895
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.892
Ca_25135 Cicer arietinum Ca_25135 I 0.892
Bo6g083690 Brassica oleracea Bo6g083690 I 0.891
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.891
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.891
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.891
Bo6g120870 Brassica oleracea Bo6g120870 I 0.891
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.891
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.891
Bra015716 Brassica rapa Bra015716 I 0.891
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.891
Bra003703 Brassica rapa Bra003703 I 0.891
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.891
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.891
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.889
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.889
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.888
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.887
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.886
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.886
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.886
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.884
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.883
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.883
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.882
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.882
Bra008285 Brassica rapa Bra008285 I 0.882
MDP0000451107 Malus domestica MDP0000451107 I 0.880
Cla007910 Citrullus lanatus Cla007910 I 0.880
MDP0000156139 Malus domestica MDP0000156139 I 0.879
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.878
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.878
Bo8g027460 Brassica oleracea Bo8g027460 I 0.875
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.875
TCM_035565 Theobroma cacao TCM_035565 I 0.875
Bra036731 Brassica rapa Bra036731 I 0.875
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.874
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.873
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.873
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.871
Ca_04385 Cicer arietinum Ca_04385 I 0.871
PGSC0003DMG400003964 Solanum tuberosum PGSC0003DMG400003964 N 0.870
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.868
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.868
GLYMA06G15500 Glycine max GLYMA06G15500 N 0.866
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.864
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.864
Cla001992 Citrullus lanatus Cla001992 I 0.864
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.863
Pm022572 Prunus mume Pm022572 I 0.861
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.861
29576.m000223 Ricinus communis 29576.m000223 I 0.859
Ca_04386 Cicer arietinum Ca_04386 I 0.859
Solyc11g005380.1 Solanum lycopersicum Solyc11g005380.1 N 0.859
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.858
Lus10033504.g Linum usitatissimum Lus10033504.g N 0.857
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.856
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.856
PK26613.1 Cannabis sativa PK26613.1 I 0.856
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.853
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.853
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.852
Lus10020873.g Linum usitatissimum Lus10020873.g N 0.850
Pm022570 Prunus mume Pm022570 I 0.849
mgf018892m Mimulus guttatus mgf018892m N 0.848
mgf021983m Mimulus guttatus mgf021983m I 0.848
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.847
PK24122.1 Cannabis sativa PK24122.1 I 0.846
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.844
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.844
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.844
Bo2g091240 Brassica oleracea Bo2g091240 I 0.843
TCM_035571 Theobroma cacao TCM_035571 I 0.842
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.840
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.840
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.840
Pm001889 Prunus mume Pm001889 I 0.838
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.836
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.830
mgf015314m Mimulus guttatus mgf015314m N 0.825
Bra003702 Brassica rapa Bra003702 I 0.822
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.822
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.821
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.821
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.821
F775_26337 Aegilops tauschii F775_26337 I 0.821
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.818
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.816
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.813
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.812