Gorai.007G371500 (Gossypium raimondii)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Gorai.007G371500 T250709_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G10030
M01258_2.00
Arabidopsis thaliana
NRMCGTTAWNN

NNWTAACGKYN
PBM
Lambert et al.(2019)
pTH11538
0.949 0.750
AT3G10030
M06971_2.00
Arabidopsis thaliana
HRHCKCCGTTANND

HNNTAACGGMGDYD
Dap-seq
OMalley et al.(2016)
AT3G10030_col_a
0.949 0.750
AT3G10030
M06972_2.00
Arabidopsis thaliana
HWRHMKCCGTTAAHD

HDTTAACGGMKDYWD
Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a
0.949 0.750
PK04914.1
M01262_2.00
Cannabis sativa
DCCGTYAN

NTRACGGH
PBM
Lambert et al.(2019)
pTH10098
0.943 0.681
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G371500.1 MADF 113 189
Gorai.007G371500.2 MADF 113 189

Links

Other MADF family TFs
Other Gossypium raimondii TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
DME_0000497501 Dracunculus medinensis DME_0000497501 I 0.000
LjSGA_030786.1 Lotus japonicus LjSGA_030786.1 I 0.000
augustus_masked-nMf.1.1.scaf34489-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf34489-processed-gene-0.0 I 0.000
augustus_masked-nMf.1.1.scaf26567-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf26567-processed-gene-0.0 I 0.000
Contig13224.0.1.g9 Oxytricha trifallax Contig13224.0.1.g9 I 0.000
GSPATT00033184001 Paramecium tetraurelia GSPATT00033184001 N 0.000
GSPATT00031815001 Paramecium tetraurelia GSPATT00031815001 I 0.000
GSPATT00030118001 Paramecium tetraurelia GSPATT00030118001 I 0.000
GSPATT00025620001 Paramecium tetraurelia GSPATT00025620001 N 0.000
GSPATT00022194001 Paramecium tetraurelia GSPATT00022194001 N 0.000
GSPATT00017939001 Paramecium tetraurelia GSPATT00017939001 I 0.000
GSPATT00015079001 Paramecium tetraurelia GSPATT00015079001 I 0.000
GSPATT00013911001 Paramecium tetraurelia GSPATT00013911001 N 0.000
GSPATT00007324001 Paramecium tetraurelia GSPATT00007324001 I 0.000