Gorai.010G096900 (Gossypium raimondii)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Gorai.010G096900 T250719_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS02G0104500
M02271_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH8719 		0.905 0.735
OS02G0104500
M02272_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH9273 		0.905 0.735
PK15172.1
M01263_2.00 		Cannabis sativa
NNNGTWAHWN
NWDTWACNNN		 PBM
Lambert et al.(2019)
pTH10125 		0.817 0.647
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.010G096900.1 MADF 356 426

Links

Other MADF family TFs
Other Gossypium raimondii TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_037381 Theobroma cacao TCM_037381 I 0.962
Gorai.001G020300 Gossypium raimondii Gorai.001G020300 I 0.953
Ciclev10010595m.g Citrus clementina Ciclev10010595m.g I 0.936
orange1.1g009174m.g Citrus sinensis orange1.1g009174m.g I 0.936
cassava25125.valid.m1 Manihot esculenta cassava25125.valid.m1 I 0.931
POPTR_0006s23800 Populus trichocarpa POPTR_0006s23800 I 0.928
SapurV1A.0710s0040 Salix purpurea SapurV1A.0710s0040 I 0.928
29739.m003611 Ricinus communis 29739.m003611 I 0.922
GSMUA_Achr7G04610_001 Musa acuminata GSMUA_Achr7G04610_001 I 0.921
GSMUA_Achr1G24120_001 Musa acuminata GSMUA_Achr1G24120_001 I 0.921
POPTR_0018s05520 Populus trichocarpa POPTR_0018s05520 I 0.920
POPTR_0310s00200 Populus trichocarpa POPTR_0310s00200 I 0.920
SapurV1A.0435s0090 Salix purpurea SapurV1A.0435s0090 I 0.920
VIT_04s0008g01850 Vitis vinifera VIT_04s0008g01850 I 0.919
POPTR_0018s05540 Populus trichocarpa POPTR_0018s05540 I 0.919
Sb04g000520 Sorghum bicolor Sb04g000520 I 0.914
Pavir.Aa03569 Panicum virgatum Pavir.Aa03569 I 0.914
Pavir.Ab00054 Panicum virgatum Pavir.Ab00054 I 0.914
GRMZM2G037128 Zea mays GRMZM2G037128 I 0.914
OB02G10400 Oryza brachyantha OB02G10400 I 0.908
Si033157m.g Setaria italica Si033157m.g I 0.908
evm.TU.supercontig_126.31 Carica papaya evm.TU.supercontig_126.31 I 0.907
OMERI02G09240 Oryza meridionalis OMERI02G09240 I 0.905
BGIOSGA007300 Oryza indica BGIOSGA007300 I 0.905
OBART02G00380 Oryza barthii OBART02G00380 I 0.905
OPUNC02G00050 Oryza punctata OPUNC02G00050 I 0.905
ONIVA02G00390 Oryza nivara ONIVA02G00390 I 0.905
ORUFI02G00410 Oryza rufipogon ORUFI02G00410 I 0.905
ORGLA02G0003500 Oryza glaberrima ORGLA02G0003500 I 0.905
OS02G0104500 Oryza sativa OS02G0104500 D 0.905
OGLUM02G00360 Oryza glumaepatula OGLUM02G00360 I 0.905
GRMZM2G111760 Zea mays GRMZM2G111760 I 0.904
GSMUA_AchrUn_randomG03020_001 Musa acuminata GSMUA_AchrUn_randomG03020_001 I 0.904
LPERR02G00380 Leersia perrieri LPERR02G00380 I 0.898
gene15385-v1.0-hybrid Fragaria vesca gene15385-v1.0-hybrid I 0.890
BRADI3G00697 Brachypodium distachyon BRADI3G00697 I 0.882
TRIUR3_30093 Triticum urartu TRIUR3_30093 I 0.882
MLOC_25460 Hordeum vulgare MLOC_25460 I 0.882
Traes_6AS_52AE4A6E2 Triticum aestivum Traes_6AS_52AE4A6E2 I 0.882
AMTR_s00001p00251940 Amborella trichopoda AMTR_s00001p00251940 I 0.881
ORGLA04G0173400 Oryza glaberrima ORGLA04G0173400 I 0.849
Pavir.Ga00673 Panicum virgatum Pavir.Ga00673 I 0.847
Eucgr.D02541 Eucalyptus grandis Eucgr.D02541 I 0.846
MDP0000122269 Malus domestica MDP0000122269 I 0.836
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.836
Traes_1DL_772D1D7DF Triticum aestivum Traes_1DL_772D1D7DF I 0.835
Traes_1AL_ED83D13D4 Triticum aestivum Traes_1AL_ED83D13D4 I 0.834
MLOC_14207 Hordeum vulgare MLOC_14207 I 0.834
Pavir.Ib03751 Panicum virgatum Pavir.Ib03751 I 0.828
SELMODRAFT_24518 Selaginella moellendorffii SELMODRAFT_24518 I 0.828
SELMODRAFT_14382 Selaginella moellendorffii SELMODRAFT_14382 I 0.828
MDP0000287231 Malus domestica MDP0000287231 N 0.824
PK15172.1 Cannabis sativa PK15172.1 D 0.817
LjSGA_134698.1 Lotus japonicus LjSGA_134698.1 I 0.815
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.815
TRIUR3_29570 Triticum urartu TRIUR3_29570 I 0.815
MDP0000284819 Malus domestica MDP0000284819 N 0.812