MDP0000701272 (Malus domestica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 MDP0000701272 T250784_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT-GTL1
M06968_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_col_a
0.898 0.809
AT-GTL1
M06969_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_colamp_a
0.898 0.809
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000701272 MADF 100 170
MDP0000701272 MADF 490 560

Links

Other MADF family TFs
Other Malus domestica TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
csin112803 Clonorchis sinensis csin112803 N 0.000
L798_08909 Zootermopsis nevadensis L798_08909 N 0.000
LotgiG192045 Lottia gigantea LotgiG192045 N 0.000
Sakowv30041822m.g Saccoglossus kowalevskii Sakowv30041822m.g N 0.000
T265_08267 Opisthorchis viverrini T265_08267 N 0.000