orange1.1g024563m.g (Citrus sinensis)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 orange1.1g024563m.g T250802_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASIL2
M06973_2.00 		Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA		 Dap-seq
OMalley et al.(2016)
At3g14180_col 		0.861 0.657
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g024563m MADF 36 109
orange1.1g025085m MADF 36 109
orange1.1g025430m MADF 36 109
orange1.1g025448m MADF 36 109
orange1.1g025651m MADF 36 109

Links

Other MADF family TFs
Other Citrus sinensis TFs

Invalid Input OrderBy

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action