Pavir.Ib02309 (Panicum virgatum)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Pavir.Ib02309 T250823_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ib02309.1.p MADF 2 76

Links

Other MADF family TFs
Other Panicum virgatum TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC10G17200 Oryza punctata OPUNC10G17200 N 0.948
ONIVA10G21280 Oryza nivara ONIVA10G21280 N 0.948
ORGLA10G0139200 Oryza glaberrima ORGLA10G0139200 N 0.948
ORUFI10G19970 Oryza rufipogon ORUFI10G19970 N 0.948
BGIOSGA033455 Oryza indica BGIOSGA033455 N 0.948
OMERI08G00160 Oryza meridionalis OMERI08G00160 N 0.948
OS10G0564200 Oryza sativa OS10G0564200 N 0.948
OGLUM10G18860 Oryza glumaepatula OGLUM10G18860 N 0.948
MLOC_4400 Hordeum vulgare MLOC_4400 N 0.948
OBART10G18780 Oryza barthii OBART10G18780 N 0.948
BRADI3G33630 Brachypodium distachyon BRADI3G33630 N 0.944
Bra021072 Brassica rapa Bra021072 N 0.870
Thhalv10025276m.g Eutrema salsugineum Thhalv10025276m.g N 0.865
Cagra.0812s0002 Capsella grandiflora Cagra.0812s0002 N 0.863
Carubv10004844m.g Capsella rubella Carubv10004844m.g N 0.863
Bostr.30275s0162 Boechera stricta Bostr.30275s0162 N 0.863
Lus10000963.g Linum usitatissimum Lus10000963.g N 0.859
Lus10040141.g Linum usitatissimum Lus10040141.g N 0.853
Solyc08g007170.1 Solanum lycopersicum Solyc08g007170.1 N 0.853
PGSC0003DMG400020508 Solanum tuberosum PGSC0003DMG400020508 N 0.853
mgf005560m Mimulus guttatus mgf005560m N 0.837
VIT_07s0005g06670 Vitis vinifera VIT_07s0005g06670 N 0.831
Bra004859 Brassica rapa Bra004859 N 0.819
Lus10011020.g Linum usitatissimum Lus10011020.g N 0.817
PGSC0003DMG400001696 Solanum tuberosum PGSC0003DMG400001696 N 0.817