CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J40572
(
Panicum virgatum
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
Pavir.J40572
T250832_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J40572.1.p
MADF
35
102
EREADAARRSAKTMWEAVAARLRERGYRRTADQCKCKWKNLVNRYKGKETSDPENGRQCPFFEELHAV
Links
Other
MADF
family TFs
Other
Panicum virgatum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si010820m.g
Setaria italica
Si010820m.g
N
0.971
OB04G31100
Oryza brachyantha
OB04G31100
N
0.965
OBART04G24140
Oryza barthii
OBART04G24140
N
0.957
Pavir.Gb00773
Panicum virgatum
Pavir.Gb00773
N
0.953
LPERR04G19850
Leersia perrieri
LPERR04G19850
N
0.945