SapurV1A.0206s0170 (Salix purpurea)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 SapurV1A.0206s0170 T250842_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GLYMA11G37390
M02269_2.00
Glycine max
BWDACYNNNN

NNNNRGTHWV
PBM
Weirauch et al.(2014)
pTH9183
0.950 0.765
cassava13991.valid.m1
M02279_2.00
Manihot esculenta
NNDACHNNNN

NNNNDGTHNN
PBM
Weirauch et al.(2014)
pTH9206
0.952 0.586
fgenesh2_kg.5__353__AT3G25990.1
M02268_2.00
Arabidopsis lyrata
NNNHAACCCCYNN

NNRGGGGTTDNNN
PBM
Weirauch et al.(2014)
pTH9228
0.948 0.559
PK20543.1
M01264_2.00
Cannabis sativa
YTAACYNNNN

NNNNRGTTAR
PBM
Lambert et al.(2019)
pTH11253
0.947 0.632
GT-1
M02263_2.00
Arabidopsis thaliana
KTTAACCM

KGGTTAAM
PBM
Weirauch et al.(2014)
pTH8149
0.943 0.870
GT-1
M10896_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GT1_Q6_02
0.943 0.870
GT-1
M10897_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GT1_Q6
0.943 0.870
GT-1
M02274_2.00
Arabidopsis lyrata
GGTTAACC

GGTTAACC
PBM
Weirauch et al.(2014)
pTH9235
0.942 0.710
29929.m004704
M02278_2.00
Ricinus communis
NDNDHDHNHN

NDNDHDHNHN
PBM
Weirauch et al.(2014)
pTH9339
0.938 0.557
OS04G0486400
M02273_2.00
Oryza sativa
YTAACYNNNN

NNNNRGTTAR
PBM
Weirauch et al.(2014)
pTH9338
0.925 0.676
MTR_3g085960
M02270_2.00
Medicago truncatula
NWAACYNNNN

NNNNRGTTWN
PBM
Weirauch et al.(2014)
pTH9208
0.932 0.594
MDP0000164819
M02280_2.00
Malus domestica
YTAACYVNNN

NNNBRGTTAR
PBM
Weirauch et al.(2014)
pTH9204
0.926 0.586
GT-4
M02265_2.00
Arabidopsis thaliana
NHDACHNNNN

NNNNDGTHDN
PBM
Weirauch et al.(2014)
pTH7910
0.920 0.536
GT-4
M06974_2.00
Arabidopsis thaliana
AACCATGGTTAADWYWWWWHH

DDWWWWRWHTTAACCATGGTT
Dap-seq
OMalley et al.(2016)
AT3G25990_col_a
0.920 0.536
GT-4
M06975_2.00
Arabidopsis thaliana
WWMNYTAACYVWRRTTADNH

DNHTAAYYWBRGTTARNKWW
Dap-seq
OMalley et al.(2016)
AT3G25990_colamp_a
0.920 0.536
VIT_17s0000g10420
M02275_2.00
Vitis vinifera
GTTAACYV

BRGTTAAC
PBM
Weirauch et al.(2014)
pTH9293
0.861 0.471
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0206s0170.1.p MADF 89 160
SapurV1A.0206s0170.2.p MADF 89 160
SapurV1A.0206s0170.3.p MADF 88 160
SapurV1A.0206s0170.4.p MADF 88 161
SapurV1A.0206s0170.5.p MADF 88 162

Links

Other MADF family TFs
Other Salix purpurea TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00005p00185670 Amborella trichopoda AMTR_s00005p00185670 I 0.916
AMTR_s00055p00209070 Amborella trichopoda AMTR_s00055p00209070 I 0.961
Aquca_011_00297 Aquilegia coerulea Aquca_011_00297 I 0.952
Aquca_123_00031 Aquilegia coerulea Aquca_123_00031 I 0.931
fgenesh2_kg.5__353__AT3G25990.1 Arabidopsis lyrata fgenesh2_kg.5__353__AT3G25990.1 D 0.953
GT-1 Arabidopsis lyrata scaffold_101505.1 D 0.942
GT-1 Arabidopsis thaliana AT1G13450 D 0.943
GT-4 Arabidopsis thaliana AT3G25990 D 0.920
Bostr.13671s0104 Boechera stricta Bostr.13671s0104 I 0.934
Bostr.0556s0275 Boechera stricta Bostr.0556s0275 I 0.949
Bo8g107400 Brassica oleracea Bo8g107400 I 0.939
Bo5g017510 Brassica oleracea Bo5g017510 I 0.928
Bo2g138840 Brassica oleracea Bo2g138840 I 0.900
Bra036354 Brassica rapa Bra036354 I 0.900
Bra026903 Brassica rapa Bra026903 I 0.939
Bra019721 Brassica rapa Bra019721 I 0.928
PK20543.1 Cannabis sativa PK20543.1 D 0.947
Cagra.6197s0012 Capsella grandiflora Cagra.6197s0012 I 0.939
Cagra.3501s0157 Capsella grandiflora Cagra.3501s0157 I 0.938
Carubv10009313m.g Capsella rubella Carubv10009313m.g I 0.938
Carubv10017413m.g Capsella rubella Carubv10017413m.g I 0.939
evm.TU.supercontig_1453.1 Carica papaya evm.TU.supercontig_1453.1 I 0.955
evm.TU.supercontig_130.35 Carica papaya evm.TU.supercontig_130.35 I 0.938
Ca_11315 Cicer arietinum Ca_11315 I 0.951
Cla023054 Citrullus lanatus Cla023054 I 0.932
Ciclev10031750m.g Citrus clementina Ciclev10031750m.g I 0.945
orange1.1g015940m.g Citrus sinensis orange1.1g015940m.g I 0.945
Cucsa.394820 Cucumis sativus Cucsa.394820 I 0.938
Eucgr.J02286 Eucalyptus grandis Eucgr.J02286 I 0.927
Eucgr.B03456 Eucalyptus grandis Eucgr.B03456 I 0.955
Thhalv10007959m.g Eutrema salsugineum Thhalv10007959m.g I 0.939
Thhalv10004359m.g Eutrema salsugineum Thhalv10004359m.g I 0.958
GLYMA11G37390 Glycine max GLYMA11G37390 D 0.955
GLYMA18G01360 Glycine max GLYMA18G01360 I 0.955
Gorai.008G163200 Gossypium raimondii Gorai.008G163200 I 0.955
Gorai.009G333800 Gossypium raimondii Gorai.009G333800 I 0.959
MLOC_64014 Hordeum vulgare MLOC_64014 I 0.919
Lus10015824.g Linum usitatissimum Lus10015824.g I 0.944
Lus10036978.g Linum usitatissimum Lus10036978.g I 0.942
LjT04G17.70.nc Lotus japonicus LjT04G17.70.nc I 0.932
MDP0000164819 Malus domestica MDP0000164819 D 0.926
MDP0000275412 Malus domestica MDP0000275412 I 0.922
cassava11841.valid.m1 Manihot esculenta cassava11841.valid.m1 I 0.952
cassava13991.valid.m1 Manihot esculenta cassava13991.valid.m1 D 0.952
MTR_3g085960 Medicago truncatula MTR_3g085960 D 0.932
mgf016368m Mimulus guttatus mgf016368m I 0.913
GSMUA_Achr5G17240_001 Musa acuminata GSMUA_Achr5G17240_001 I 0.948
GSMUA_Achr3G19370_001 Musa acuminata GSMUA_Achr3G19370_001 I 0.956
OB04G23970 Oryza brachyantha OB04G23970 I 0.898
OS04G0486400 Oryza sativa OS04G0486400 D 0.925
Pavir.Ga01561 Panicum virgatum Pavir.Ga01561 I 0.924
PDK_20s1345831g002 Phoenix dactylifera PDK_20s1345831g002 I 0.914
POPTR_0008s17980 Populus trichocarpa POPTR_0008s17980 I 0.963
POPTR_0010s06510 Populus trichocarpa POPTR_0010s06510 I 0.926
Pm006885 Prunus mume Pm006885 I 0.926
Pm016214 Prunus mume Pm016214 I 0.925
PRUPE_ppa005942mg Prunus persica PRUPE_ppa005942mg I 0.925
PRUPE_ppa009404mg Prunus persica PRUPE_ppa009404mg I 0.931
29929.m004704 Ricinus communis 29929.m004704 D 0.938
SapurV1A.1719s0020 Salix purpurea SapurV1A.1719s0020 I 0.942
Si036121m.g Setaria italica Si036121m.g I 0.925
Si010147m.g Setaria italica Si010147m.g I 0.924
Solyc12g077540.1 Solanum lycopersicum Solyc12g077540.1 I 0.924
TCM_010751 Theobroma cacao TCM_010751 I 0.959
VIT_17s0000g10420 Vitis vinifera VIT_17s0000g10420 D 0.873
VIT_14s0171g00450 Vitis vinifera VIT_14s0171g00450 I 0.951
VIT_01s0010g02420 Vitis vinifera VIT_01s0010g02420 I 0.955
GRMZM2G047370 Zea mays GRMZM2G047370 I 0.924