Thhalv10007000m.g (Eutrema salsugineum)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Thhalv10007000m.g T250869_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.969 0.986
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.969 0.986
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10007000m MADF 78 149
Thhalv10007000m MADF 447 519
Thhalv10007163m MADF 78 149
Thhalv10007163m MADF 447 519

Links

Other MADF family TFs
Other Eutrema salsugineum TFs

Invalid Input OrderBy

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action