PK14727.1 (Cannabis sativa)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 PK14727.1 T251169_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK15172.1
M01263_2.00 		Cannabis sativa
NNNGTWAHWN
NWDTWACNNN		 PBM
Lambert et al.(2019)
pTH10125 		0.935 0.786
OS02G0104500
M02271_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH8719 		0.878 0.657
OS02G0104500
M02272_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH9273 		0.878 0.657
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK14727.1 MADF 100 172

Links

Other MADF family TFs
Other Cannabis sativa TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_21.195 Carica papaya evm.TU.supercontig_21.195 I 0.971
Traes_1DL_772D1D7DF Triticum aestivum Traes_1DL_772D1D7DF I 0.965
MDP0000122269 Malus domestica MDP0000122269 I 0.962
Pavir.Ga00673 Panicum virgatum Pavir.Ga00673 I 0.961
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.961
ORGLA04G0173400 Oryza glaberrima ORGLA04G0173400 I 0.958
Traes_1AL_ED83D13D4 Triticum aestivum Traes_1AL_ED83D13D4 I 0.957
MLOC_14207 Hordeum vulgare MLOC_14207 I 0.957
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.956
Eucgr.D02541 Eucalyptus grandis Eucgr.D02541 I 0.953
Bo6g083670 Brassica oleracea Bo6g083670 I 0.953
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.951
TRIUR3_29570 Triticum urartu TRIUR3_29570 I 0.951
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.950
BGIOSGA011584 Oryza indica BGIOSGA011584 I 0.948
Lus10028584.g Linum usitatissimum Lus10028584.g I 0.945
LjSGA_034643.2 Lotus japonicus LjSGA_034643.2 I 0.943
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.943
Traes_4DL_DC6A55EEE Triticum aestivum Traes_4DL_DC6A55EEE I 0.941
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.941
PK15172.1 Cannabis sativa PK15172.1 D 0.935
Pavir.J25029 Panicum virgatum Pavir.J25029 I 0.935
Aquca_023_00132 Aquilegia coerulea Aquca_023_00132 I 0.926
Pavir.Ib03751 Panicum virgatum Pavir.Ib03751 I 0.921
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.914
VIT_04s0008g01850 Vitis vinifera VIT_04s0008g01850 I 0.903
OB02G10400 Oryza brachyantha OB02G10400 I 0.897
GSMUA_Achr7G04610_001 Musa acuminata GSMUA_Achr7G04610_001 I 0.890
orange1.1g009174m.g Citrus sinensis orange1.1g009174m.g I 0.890
GRMZM2G037128 Zea mays GRMZM2G037128 I 0.890
Pavir.Aa03569 Panicum virgatum Pavir.Aa03569 I 0.890
Sb04g000520 Sorghum bicolor Sb04g000520 I 0.890
Ciclev10010595m.g Citrus clementina Ciclev10010595m.g I 0.890
Pavir.Ab00054 Panicum virgatum Pavir.Ab00054 I 0.890
LPERR02G00380 Leersia perrieri LPERR02G00380 I 0.886
cassava25125.valid.m1 Manihot esculenta cassava25125.valid.m1 I 0.879
ORUFI02G00410 Oryza rufipogon ORUFI02G00410 I 0.878
ONIVA02G00390 Oryza nivara ONIVA02G00390 I 0.878
OMERI02G09240 Oryza meridionalis OMERI02G09240 I 0.878
OGLUM02G00360 Oryza glumaepatula OGLUM02G00360 I 0.878
OBART02G00380 Oryza barthii OBART02G00380 I 0.878
BGIOSGA007300 Oryza indica BGIOSGA007300 I 0.878
OPUNC02G00050 Oryza punctata OPUNC02G00050 I 0.878
ORGLA02G0003500 Oryza glaberrima ORGLA02G0003500 I 0.878
OS02G0104500 Oryza sativa OS02G0104500 D 0.878
GRMZM2G111760 Zea mays GRMZM2G111760 I 0.877
SapurV1A.0435s0090 Salix purpurea SapurV1A.0435s0090 I 0.876
POPTR_0018s05520 Populus trichocarpa POPTR_0018s05520 I 0.876
POPTR_0310s00200 Populus trichocarpa POPTR_0310s00200 I 0.876
POPTR_0018s05540 Populus trichocarpa POPTR_0018s05540 I 0.875
gene15385-v1.0-hybrid Fragaria vesca gene15385-v1.0-hybrid I 0.871
POPTR_0006s23800 Populus trichocarpa POPTR_0006s23800 I 0.866
29739.m003611 Ricinus communis 29739.m003611 I 0.866
SapurV1A.0710s0040 Salix purpurea SapurV1A.0710s0040 I 0.866
Si033157m.g Setaria italica Si033157m.g I 0.858
SELMODRAFT_24518 Selaginella moellendorffii SELMODRAFT_24518 I 0.857
SELMODRAFT_14382 Selaginella moellendorffii SELMODRAFT_14382 I 0.857
GSMUA_AchrUn_randomG03020_001 Musa acuminata GSMUA_AchrUn_randomG03020_001 I 0.854
Traes_6AS_52AE4A6E2 Triticum aestivum Traes_6AS_52AE4A6E2 I 0.849
TRIUR3_30093 Triticum urartu TRIUR3_30093 I 0.849
BRADI3G00697 Brachypodium distachyon BRADI3G00697 I 0.849
TCM_037381 Theobroma cacao TCM_037381 I 0.845
GSMUA_Achr1G24120_001 Musa acuminata GSMUA_Achr1G24120_001 I 0.837
GLYMA09G01670 Glycine max GLYMA09G01670 N 0.833
MLOC_25460 Hordeum vulgare MLOC_25460 I 0.821
GLYMA15G12591 Glycine max GLYMA15G12591 N 0.821
LjSGA_134698.1 Lotus japonicus LjSGA_134698.1 I 0.819
evm.TU.supercontig_126.31 Carica papaya evm.TU.supercontig_126.31 I 0.813