CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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PK15172.1
(
Cannabis sativa
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
PK15172.1
T251170_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK15172.1
M01263_2.00
Cannabis sativa
NNNGTWAHWN
NWDTWACNNN
PBM
Lambert et al.(2019)
pTH10125
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OS02G0104500
M02271_2.00
Oryza sativa
NDGTAAWWHN
NDWWTTACHN
PBM
Weirauch et al.(2014)
pTH8719
0.873
0.716
OS02G0104500
M02272_2.00
Oryza sativa
NDGTAAWWHN
NDWWTTACHN
PBM
Weirauch et al.(2014)
pTH9273
0.873
0.716
For this family, TFs with SR scores >
0.812
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01263_2.00
MADF
24
93
EFKYQEAGPKGPLWEDISGEMTRMGYKRSAKRCKEKWENINKYFKKVKESNKQRPEDAKTCPYFHELDAL
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK15172.1
MADF
24
93
EFKYQEAGPKGPLWEDISGEMTRMGYKRSAKRCKEKWENINKYFKKVKESNKQRPEDAKTCPYFHELDAL
Links
Other
MADF
family TFs
Other
Cannabis sativa
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy