PK27404.1 (Cannabis sativa)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 PK27404.1 T251180_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK27404.1_CONSTRUCT
M01261_2.00
PBM CONSTRUCTS
NNGGTAAAWN

NWTTTACCNN
PBM
Lambert et al.(2019)
pTH11345
0.966 1.000
PK26075.1
M01265_2.00
Cannabis sativa
NNRGTDANWN

NWNTHACYNN
PBM
Lambert et al.(2019)
pTH11260
0.829 0.612
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK27404.1 MADF 76 145

Links

Other MADF family TFs
Other Cannabis sativa TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PK27404.1_CONSTRUCT PBM CONSTRUCTS PK27404.1_CONSTRUCT D 0.966
LjSGA_010102.1 Lotus japonicus LjSGA_010102.1 I 0.925
Bo6g083660 Brassica oleracea Bo6g083660 I 0.874
LjT17C10.90.nd Lotus japonicus LjT17C10.90.nd I 0.867
PK26075.1 Cannabis sativa PK26075.1 D 0.829
Traes_1DL_9EFDBD741 Triticum aestivum Traes_1DL_9EFDBD741 I 0.817