CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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msantd3
(
Xenopus tropicalis
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
XB-GENE-5737820
T251189_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MSANTD3
M01259_2.00
Homo sapiens
SBNCACTCAM
KTGAGTGNVS
PBM
Lambert et al.(2019)
pTH11241
0.970
0.842
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAI35255
MADF
21
110
LLALVEKYKYVLECKKSDARTIALKQRTWQALAHEYNSQPSVSLRDFKQLKKCWENIKARTKKIMAHERREKGKLFGPESNSHQALKEKV
CAJ82361
MADF
21
110
LLALVEKYKYVLECKKSDARTIALKQRTWQALAHEYNSQPSVSLRDFKQLKKCWENIKARTKKIMAHERREKGKLFGPESNSHQALKEKV
Links
Other
MADF
family TFs
Other
Xenopus tropicalis
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy