naif1 (Xenopus tropicalis)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 XB-GENE-986890 T251192_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
naif1
M02281_2.00		 Xenopus tropicalis
NNNCGYANN
NNTRCGNNN		 PBM
Weirauch et al.(2014)
pTH8560		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
naif1.S
M02282_2.00 		Xenopus laevis
NNDRCGTAN
NTACGYHNN		 PBM
Weirauch et al.(2014)
pTH9299 		0.951 0.661
NAIF1_CHICK
M01260_2.00 		Gallus gallus
NNNDRCGTAN
NTACGYHNNN		 PBM
Lambert et al.(2019)
pTH9808 		0.892 0.581
For this family, TFs with SR scores > 0.812 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02281_2.00 MADF 23 102

DNA Binding Domains

Protein ID Domain From To Sequence
AAI28615 MADF 33 102
CAJ81322 MADF 23 102

Links

Other MADF family TFs
Other Xenopus tropicalis TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
naif1.S Xenopus laevis XB-GENE-986896 D 0.970
naif1 Gasterosteus aculeatus ENSGACG00000018458 I 0.911
naif1 Oryzias latipes ENSORLG00000018283 I 0.911
ENSLACG00000016334 Latimeria chalumnae ENSLACG00000016334 I 0.909
ENSONIG00000012590 Oreochromis niloticus ENSONIG00000012590 I 0.909
ENSMEUG00000000224 Macropus eugenii ENSMEUG00000000224 I 0.907
NAIF1 Monodelphis domestica ENSMODG00000005695 I 0.907
NAIF1 Procavia capensis ENSPCAG00000011530 I 0.907
naif1 Takifugu rubripes ENSTRUG00000013589 I 0.894
NAIF1 Taeniopygia guttata ENSTGUG00000003526 I 0.892
NAIF1 Meleagris gallopavo ENSMGAG00000003576 I 0.892
NAIF1 Gallus gallus ENSGALG00000027734 I 0.892
Aan_R009291 Calypte anna Aan_R009291 I 0.892
Afo_R001565 Aptenodytes forsteri Afo_R001565 I 0.892
NAIF1_CHICK Gallus gallus NAIF1_CHICK D 0.892
ENSFALG00000001298 Ficedula albicollis ENSFALG00000001298 I 0.892
ENSPPYG00000019640 Pongo abelii ENSPPYG00000019640 I 0.889
ENSBTAP00000016123-D1 Bos grunniens ENSBTAP00000016123-D1 I 0.889
ENSP00000362170 Macaca fascicularis ENSP00000362170 I 0.889
ENSOPRG00000016390 Ochotona princeps ENSOPRG00000016390 I 0.889
NAIF1 Pan troglodytes ENSPTRG00000021409 I 0.889
ENSPANG00000024836 Papio anubis ENSPANG00000024836 I 0.889
NAIF1 Tursiops truncatus ENSTTRG00000016473 I 0.889
NAIF1 Sus scrofa ENSSSCG00000005630 I 0.889
NAIF1 Otolemur garnettii ENSOGAG00000031498 I 0.889
NAIF1 Sorex araneus ENSSARG00000011449 I 0.889
ENSTSYG00000001421 Tarsius syrichta ENSTSYG00000001421 I 0.889
NAIF1 Pteropus vampyrus ENSPVAG00000002431 I 0.889
Naif1 Rattus norvegicus ENSRNOG00000050204 I 0.889
ENSSTOG00000007837 Ictidomys tridecemlineatus ENSSTOG00000007837 I 0.889
ENSOARG00000010974 Ovis aries ENSOARG00000010974 I 0.889
NAIF1 Equus caballus ENSECAG00000014827 I 0.889
NAIF1 Erinaceus europaeus ENSEEUG00000009746 I 0.889
NAIF1 Felis catus ENSFCAG00000001494 I 0.889
NAIF1 Oryctolagus cuniculus ENSOCUG00000013385 I 0.889
NAIF1 Dasypus novemcinctus ENSDNOG00000034148 I 0.889
ENSCSAG00000013989 Chlorocebus sabaeus ENSCSAG00000013989 I 0.889
NAIF1 Bos taurus ENSBTAG00000012156 I 0.889
NAIF1 Canis familiaris ENSCAFG00000020093 I 0.889
NAIF1 Callithrix jacchus ENSCJAG00000019895 I 0.889
ENSCPOG00000008322 Cavia porcellus ENSCPOG00000008322 I 0.889
NAIF1 Gorilla gorilla ENSGGOG00000011178 I 0.889
NAIF1 Homo sapiens ENSG00000171169 I 0.889
Naif1 Mus musculus ENSMUSG00000039164 I 0.889
NAIF1 Myotis lucifugus ENSMLUG00000013565 I 0.889
ENSMPUG00000013510 Mustela putorius furo ENSMPUG00000013510 I 0.889
ENSNLEG00000017520 Nomascus leucogenys ENSNLEG00000017520 I 0.889
ENSMICG00000012773 Microcebus murinus ENSMICG00000012773 I 0.889
NAIF1 Loxodonta africana ENSLAFG00000031104 I 0.889
ENSAMEG00000015231 Ailuropoda melanoleuca ENSAMEG00000015231 I 0.889
NAIF1 Macaca mulatta ENSMMUG00000004685 I 0.889
ENSXMAG00000013359 Xiphophorus maculatus ENSXMAG00000013359 I 0.886
ENSPFOG00000005824 Poecilia formosa ENSPFOG00000005824 I 0.886
Brh_R009924 Buceros rhinoceros Brh_R009924 I 0.885
ENSPSIG00000007027 Pelodiscus sinensis ENSPSIG00000007027 I 0.881
ENSLOCG00000006120 Lepisosteus oculatus ENSLOCG00000006120 I 0.878
ENSGMOG00000008831 Gadus morhua ENSGMOG00000008831 I 0.870
ENSAMXG00000012133 Astyanax mexicanus ENSAMXG00000012133 I 0.869
Pvit_08550 Pogona vitticeps Pvit_08550 I 0.868
naif1 Tetraodon nigroviridis ENSTNIG00000002538 I 0.857
naif1 Danio rerio ENSDARG00000062753 I 0.844