naif1 (Xenopus tropicalis)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 XB-GENE-986890 T251192_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
naif1
M02281_2.00		 Xenopus tropicalis
NNNCGYANN
NNTRCGNNN		 PBM
Weirauch et al.(2014)
pTH8560		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
naif1.S
M02282_2.00 		Xenopus laevis
NNDRCGTAN
NTACGYHNN		 PBM
Weirauch et al.(2014)
pTH9299 		0.951 0.661
NAIF1_CHICK
M01260_2.00 		Gallus gallus
NNNDRCGTAN
NTACGYHNNN		 PBM
Lambert et al.(2019)
pTH9808 		0.860 0.452
For this family, TFs with SR scores > 0.812 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02281_2.00 MADF 23 102

DNA Binding Domains

Protein ID Domain From To Sequence
AAI28615 MADF 33 102
CAJ81322 MADF 23 102

Links

Other MADF family TFs
Other Xenopus tropicalis TFs

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62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action